Pseudoalteromonas sp. SM9913: PSM_A1464
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Entry
PSM_A1464 CDS
T01374
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A, type II topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psm03032
]
PSM_A1464 (gyrA)
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A1464 (gyrA)
Enzymes [BR:
psm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSM_A1464 (gyrA)
DNA replication proteins [BR:
psm03032
]
Prokaryotic type
DNA Topoisomerases
PSM_A1464 (gyrA)
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSM_A1464 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADT68396
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Position
I:1584285..1586984
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AA seq
899 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLALIQNPELTITELMDYIPGPDFPTAAIINGKKGIEQAYQTGRGKV
YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKVALTARPWELGNV
KAMLDKAGEDNVARPDWLASELGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTEYQ
SLLELIAELLFILANPERLMEVIRDELVEIKEQYGDERRTEINAAAHDISLEDLINEENV
VVTLSHEGYVKYQALTDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPVRDYEDDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGSNEIMLFTDAGKVVRFKEAEETAVVDENG
NPVLDEEGKPEIRFKGVRPMGRTATGVRGIKMPDDQRVVSLIVPKNDGAILTVTENGYGK
RTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVTESDLVDIEDVETVDTVIDEVADDNPPSE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagacgagttaaaaaactcc
tacttagattacgccatgagtgtaattgtaggacgtgcattaccagacgtacgtgacggt
ttaaaacctgttcaccgccgcgttttgtttgcaatgaacgagcttagtaatgactggaac
aagccttacaaaaaatcggcccgtgtggtcggtgacgtaatcggtaaataccacccacac
ggcgacagtgcagtttatgacaccatcgtacgtatggctcagccattctcactgcgttac
atgctagtagatggtcagggtaactttggttcggttgatggtgattcagcagcggcaatg
cgttatacagaagtacgtatggcaaaaatgtcgcacgaattattagccgatcttgaaaaa
gaaacggttgattttgtgcctaactacgatggcacagagcaaattcctgatgtgttaccc
actaaaatacctaacctgttagttaatggttcatcgggtattgcggttggtatggcaaca
aatattccgccacataacttaacagaagtcgtgaatggctgtttagcgcttattcaaaac
cctgaattgaccattactgagttaatggattacattcctgggcctgatttcccaactgcg
gcgattattaacggtaaaaaaggcattgaacaagcttatcaaaccggtcgtggtaaagtg
tacatgcgtgcgcgtgctgacatcgaaaccgatgaaaagacgggtcgcgaaaccattatt
gttcatgaaatcccttaccaagttaacaaagcacgtttgattgaaaaaatcgccgagcta
gttaaagataaaaaaattgaagggatcagcgcattacgtgatgaatcagataaagatggt
atgcgtatcgttatcgagatcaaacgtggtgacgtaggtgaagttattttaaacaacctt
tattcacaaactcagttacaaactgtgtttggtatgaatatggttgcgttaattaataac
caacctaagtgtttcaacttaaaagaaatgcttgaagaatttattattcaccgccgtgaa
gttgttacccgtcgtacggtatttgatttacgcaaagcccgcgaccgtgcgcatacgcta
gaaggtttagcgattgcactggctaacattgacccaattatcgaacttattcgtaagtcg
ccaacacctgctgaagcaaaagttgcattaacagcgcgtccatgggaattaggtaatgtt
aaagccatgcttgataaagcaggcgaagacaacgtagcacgcccagattggttagcaagc
gagcttggtattcgtgatggtcagtactatatttctgagcaacaagctcaagcaatatta
gacttacgtttacataaacttactggtcttgaacacgaaaaaattcttaccgaatatcaa
tcattacttgagttgattgctgagttattattcattttggcaaatccagagcgtttaatg
gaagttattcgtgatgagctcgttgaaattaaagagcaatatggtgatgagcgccgcact
gaaataaatgctgcagcacatgatattagccttgaagatttaatcaacgaagaaaacgta
gttgttacgctttcacatgaagggtacgttaagtatcaagcattaactgattacgaagcg
cagcgtcgtggtggtaaaggtaaatcagcaactaagatgaaagatgaagatttcattgaa
cgtttattggttgccaatacgcacgatactattctttgtttctctacagcgggtcgttta
tattggcttaaagtataccagttgccacttgccagtcgtgcagcgcgcggtaagccaatt
gttaacttattaccacttgaagcagatgaacgtattactgcaatcctgccagtacgcgat
tatgaagatgataaatacatctttatggcgacggcgttcggtacggttaagaagacgcca
ttaacggcatacagtcgtcaacgtgcaagcggtattattgcggttaacttaaacgaaggt
gatagcttaatcggtgttgatattaccgatggcagcaacgaaattatgttgttcactgat
gcgggtaaagttgttcgctttaaagaagctgaagaaacagctgttgttgatgaaaatggt
aacccagtactagacgaagaaggcaaacctgaaatccgtttcaaaggtgtacgtcctatg
ggccgtactgcaacgggtgttcgtggtattaagatgccagacgatcagcgtgttgtatca
cttattgtaccaaagaatgatggtgcaatattaacagtgacagaaaatggctacggcaag
cgtacccaacttgaagattacccatctaagagtcgtgcaactcaaggtgttgtatcaatc
aaagtgagtgagcgtaacggtgctgttgttggtgctgtacaggttgatgacaacgacgaa
ataatgattatttcgaatcgtggtaccttagtacgtactcgcgttaatgaagtttctacg
gttggacgtaacacccaaggtgttattttgatcagaactattgacgaagagcaagtagtt
ggtttacaacgtatagaagaaattgaagtgactgaaagtgacttggttgatatcgaagac
gttgaaacagtagatacagttattgatgaagtggcggatgacaatcctccttcagaataa
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