Pseudoalteromonas sp. SM9913: PSM_A1475
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Entry
PSM_A1475 CDS
T01374
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase, DEAD box
Organism
psm
Pseudoalteromonas sp. SM9913
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_11
SecA_DEAD
Helicase_RecD
AAA_22
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
ADT68407
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Position
I:complement(1595912..1597234)
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AA seq
440 aa
AA seq
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MHFTDLGIDTRLETQLAHQGITQPTDIQAHAVPTALAGHDIFAQSKTGSGKTLAFLLPAV
QRVMKQKALSKRDPRVLIVAPTRELATQVFTQLRLLIAGTNIKAVKILGGENFNDQIKAL
RNDPHFVVATPGRLADHLKQRSLQLSGLELLIFDEADRILDLGFTDQLKLINELADHRLR
QTLLFSATLDHAQVDALSRNLLKKPKQIMLSAANEQHSDIKQTLYLADHLDHKEALLEHF
LNQDNVGQCIIFTATRADTSRLSESLNSKGFKSVALAGDLTQSKRLDIMDAFSRENFKIL
ITTDVASRGLDLLSVTHVINFDLPKHAEEYVHRIGRTGRAGFKGNALSLVGPKDWASYLA
IKSFLNDELSFAAVEGFKAKFKGIKEKKVAPIKPTKKAVTANKPQPKRKAKPKKPAAPIK
APLNIDGDTPMRRKKKPEQE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgcactttactgatcttgggattgatactcgcctagaaacacaattagcgcaccaaggg
atcacccagcctaccgatattcaagctcatgctgtgccaacggcactggcgggacatgac
attttcgctcagtcaaaaactgggtcaggcaaaactttagcgtttttattaccggctgtg
cagcgtgtaatgaaacaaaaagcactcagtaaacgtgatcctcgtgtacttattgttgct
ccaactcgtgagcttgcgacccaagtttttactcaacttcgattacttattgccggtacc
aacataaaggccgttaaaatcctcggtggcgaaaattttaacgaccaaattaaagcactg
cgtaacgaccctcactttgtggtcgccacaccgggtcgtttagccgatcatttaaagcaa
cgttcattacaattaagtggcctagagttacttatatttgatgaagctgaccgtatttta
gatttaggttttaccgatcaacttaaattaattaatgaactggccgatcatcgtcttcgt
caaactttgttgttttcggcgacattagatcatgctcaagttgatgcgttatcgcgtaat
ttattaaaaaaaccaaaacaaattatgctcagtgcagccaatgagcaacacagtgatatt
aaacaaacattgtatttagctgaccaccttgatcataaagaagcactgcttgagcacttt
ttaaaccaagataacgtcggccagtgcattatatttactgccacacgagctgataccagc
cgtttaagtgaatcattaaatagtaaaggctttaaatctgtcgcattagctggggattta
actcaaagtaagcgccttgatattatggatgcgtttagccgtgaaaactttaaaatatta
attactacagatgttgcttcgcgcggtttagatttactcagtgttacccatgttattaac
tttgatttaccaaaacacgcagaagaatacgttcatcgtattggtagaactggtcgtgct
ggttttaaaggtaacgcattatcacttgtgggccctaaagattgggcaagttacttggca
ataaaatcatttttaaatgatgaattatcgtttgctgctgttgagggtttcaaagcgaaa
tttaaaggtattaaagagaaaaaagtagcgccaattaaaccgactaaaaaagcagtgacc
gcgaataagccacagccaaaacgaaaagcaaaaccgaaaaagccagcggccccaattaaa
gcacctcttaatattgatggtgataccccgatgcgtcgtaaaaaaaagcctgagcaggaa
taa
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