Pseudoalteromonas sp. SM9913: PSM_A1482
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Entry
PSM_A1482 CDS
T01374
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm03030
DNA replication
psm03430
Mismatch repair
psm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSM_A1482
03430 Mismatch repair
PSM_A1482
03440 Homologous recombination
PSM_A1482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psm03032
]
PSM_A1482
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A1482
Enzymes [BR:
psm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSM_A1482
DNA replication proteins [BR:
psm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSM_A1482
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSM_A1482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
ADT68414
LinkDB
All DBs
Position
I:1605251..1605952
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AA seq
233 aa
AA seq
DB search
MAKSPLDWSQRYEQLLQTAQNPLLKDFYQQAFTNQAAPLKDVPFVALDFETTGLDANSDD
IVSVGLVPFNVNRIYCKESRHWVVQPRRDLSEESIVIHGITHSEVDEAPDLNRILAPLLD
ALKGKVVVVHYAAIERHFFYNALLMRIKEGIEFALVDTMEIERRALKARQGLLGRLFNSK
LGSLRLSDTRERYSLPLYQNHNALTDALATAELLQAQLSYHYRSDTPVSEIWL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcaccgttagattggtcacagcgctacgagcagttattgcaaactgcgcaa
aacccgttacttaaagacttttatcaacaagcgtttaccaatcaggctgctccacttaaa
gatgtcccttttgtggcgctcgactttgaaacaaccggccttgatgcgaatagcgatgat
attgttagtgtggggctggtgccttttaatgtaaatcgtatttattgtaaagagagccgt
cactgggtggtgcaaccacgacgagatttaagtgaagagtcaatcgttattcatggaatt
actcattcagaagtggatgaagcccctgatcttaatcgaattttagcgccactgcttgat
gcccttaaaggcaaagtggtggtggtacattatgctgcaatagaacgtcattttttttat
aacgcgctacttatgcgtataaaagagggcatagagtttgcactagttgatacgatggaa
atagaaaggcgggcgcttaaagcgcggcaggggttattaggcaggctgtttaattcaaag
ctaggatcacttaggttaagtgatacacgggagcgttattcattgccactgtatcaaaac
cataatgcgcttactgatgcactagccactgccgagctgctgcaagcgcagctgagttac
cactatagatcagacacgccagtgagtgaaatttggctttag
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