Pseudoalteromonas sp. SM9913: PSM_A1633
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Entry
PSM_A1633 CDS
T01374
Symbol
msbA
Name
(GenBank) lipid transport protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSM_A1633 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psm02000
]
PSM_A1633 (msbA)
Enzymes [BR:
psm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PSM_A1633 (msbA)
Transporters [BR:
psm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PSM_A1633 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
ABC_ATPase
AmpE
AAA_16
MMR_HSR1
APS_kinase
AAA_25
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
ADT68560
LinkDB
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Position
I:complement(1748757..1750502)
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AA seq
581 aa
AA seq
DB search
MDQSTTQIYKRLVSYVGAYKSVAIVAIIGMIGYSGMDALFIQLMKPFIDEGLNERNSQVL
TYAPFVVIALVIGRGVFNFMSSYCLSYVGSQVVRALRQELFEHILHLPVSFHDKNSTGDL
ISKITFDTEQVQQAITKALLIVVREGAFVVFLLAVMFYTSWQLSLIFLVIIPLVAIIVAV
VSKRFRHISKNIQSAMGQVTRSSEQMLSGHKVIHGFGGQTQEIDQFSKINNHNRQQRIKM
DATKALSVSIIQILAASAMAVILWVVSMPSMIDSISSGDFVVLISSMMMLLRPLKQLANV
NSDLQRGISAAQSVFLVLDEEIEKDTGTLSVDKVKGHIEVKNVTFKYPTKDEPVLNNLSM
TIKAGESIALVGRSGSGKSTISNLLPRYYDLEAPSEILLDGIALNEYKLTDLRRQFALVS
QQVVLFNDTIANNICYGLQRDVSMEELHAVAKQAHVWEFVKDLPEQLNTMVGENGVMLSG
GQRQRIAIARAILKDAPILILDEATSALDTESEKLIQHALDTLMKDKTSIVIAHRLSTIE
NSDRIYVIDSGQVIESGTHTDLLANDGTYSALCKMQFGEQG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagtactacacaaatttataaacggcttgtttcttacgttggtgcctataag
tcggttgccatcgtcgcaattattggaatgataggttattcaggtatggatgcattattt
atccaactgatgaagccgtttatcgatgaaggtttaaatgagcgtaatagtcaggtactt
acttatgcgccatttgtggttattgcgttggtgatcgggcgtggcgtatttaattttatg
tcatcgtactgtttaagctatgttggttcgcaggtagtgcgtgcgcttcgccaagaacta
tttgagcatatattacatttgccagtatcgtttcatgataaaaactcgactggcgacctt
atttcaaaaattacctttgatacagagcaagtacagcaagcgattaccaaagcattgctt
attgtagttcgtgaaggcgcttttgtggtgtttttacttgcagttatgttttataccagc
tggcaattatcgttaatctttttagttattattccattagtggctattatagtggcggtg
gtatctaaacgttttcgtcatatatctaaaaatattcagtctgcgatggggcaagttacc
cgcagctcagagcaaatgctcagtggtcacaaagtgatccacggctttggtggtcaaact
caagaaatcgatcaattttctaaaattaataatcataatcgccagcaacgtatcaaaatg
gatgcgactaaggcgttaagtgtctctatcattcaaattttagccgccagtgcaatggcc
gttattttatgggtggtgtctatgccctcaatgatagacagtattagctctggggatttt
gtagtgctcatttcttcgatgatgatgttactacgcccgttaaaacagcttgccaatgtg
aacagcgatttacaacgcggtatttcagctgcgcagagtgtatttttagtgctagatgaa
gaaatagaaaaagacacgggcaccttatcggttgataaagttaaaggtcatattgaggta
aaaaatgtcacctttaaatacccaaccaaagacgagccggtattaaataatttgtctatg
actattaaagcgggcgagagcattgcgcttgttggccgctcaggctcgggtaaatccacc
atatcaaacttattacctcgctattatgatttagaagcgcccagtgaaatattactggat
ggtattgctttaaatgaatataagctcaccgatttacgtcgtcaatttgctttagtatcg
cagcaagtggtgctttttaatgacacgattgcaaataatatttgttatggcctccaacgc
gatgtatcgatggaagagcttcatgctgtggctaaacaagctcatgtgtgggagtttgtt
aaagatttaccggagcaacttaacactatggttggtgaaaatggggtgatgctttcaggt
ggtcagcgtcaacgtatcgcgattgctcgcgcaatattaaaagatgcaccaattttaatt
ttagatgaagcgacctcggcgctggatactgaatcagaaaaactcattcaacatgccctc
gatacattaatgaaagacaaaacgtctattgtaattgcgcataggttatcgactattgaa
aatagtgaccgcatttatgtaatagacagtggtcaagttattgaaagtggtacccataca
gatttacttgctaacgatggcacttattctgcgttatgcaaaatgcagtttggtgagcaa
gggtga
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