Pseudoalteromonas sp. SM9913: PSM_A1918
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Entry
PSM_A1918 CDS
T01374
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSM_A1918 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A1918 (uvrB)
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSM_A1918 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSM_A1918 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
Kinesin
DUF87
UB2H
Cas3-like_C_2
AAA
AAA_5
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADT68842
LinkDB
All DBs
Position
I:complement(2052619..2054613)
Genome browser
AA seq
664 aa
AA seq
DB search
MSDHFQLESKFKPAGDQPTAIAQLCEGLEAGLAHQTLLGATGTGKTFTMANIISDLNRPT
IIMAHNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMKMMLLLKVGEKVDQRDMLRRLAELQ
YTRNDIDFSRGTYRVRGEVVDIFPAESDTYAVRVEMFDDEVERLSIFDPLTGAVEKHIVR
ATIYPKTHYVTPREKILEAIEKIKVELKERRAQLLSANKLVEEQRIAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRMPSAMDNRPLRFEEFEAIAPQTIYVSATPGDFELERSNGEVAEQVIRPTGLLD
PLIEVRPVGDQVDDLLSEIYKSVEKGERVLVTTLTKRMAEDLTDYLSEHNVKVRYLHSDI
DTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSARSLIQTIG
RAARHLDGRAILYGDRITKSMAKAIDETQRRRDIQHAYNVKHGIEPKALIKKILDVMDVG
EDASPQDNLQLIRKESKKILSAKEIATQIKQLETKMHAYASDLEFEKAASVRDEIHELQQ
QLIN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgatcattttcagttagaatcaaaatttaaacccgctggggatcagcctaccgct
atcgctcagttgtgcgaaggtttagaagcagggcttgctcatcaaaccttattgggcgca
acagggacgggaaaaaccttcacgatggctaacatcattagtgatttaaatcgccccact
attattatggcgcacaataaaaccttagcggcgcaattatacggcgagatgaaagaattt
ttcccgcataatgcagttgagtactttgtatcttactacgattactaccaaccagaagcc
tacgtggtagccagcgacacctttattgaaaaagatgcatccatcaatgaacacattgag
caaatgcggctcagcgccactaaagcgctgttagagcgtcgcgataccataatcgttgcg
tcggtatcggcgatttatggtctgggcgatcctgattcatacatgaaaatgatgctgctt
ttaaaagtgggcgaaaaagtcgaccagcgcgatatgctgcgccgccttgcagagctgcaa
tacacccgtaacgatattgattttagtcgtggtacatatcgtgttcgcggcgaagtggtg
gatatatttcccgctgaatcagatacctatgcagtacgtgtagaaatgtttgatgatgaa
gttgaacgcctaagtatttttgaccccctcactggtgctgttgaaaaacatatagtgcgt
gcaactatttaccctaaaactcactatgtaacgccacgagaaaaaatactcgaagccatc
gaaaaaataaaagttgagcttaaagagcgcagggcacaattactcagcgctaataaatta
gttgaagagcaacgtattgcgcagcgtacccaatacgacatagaaatgatgaccgagctt
ggttattgctcaggcattgaaaactacagtcgttacttatcggggcgtacacctggtgat
ccaccgccaacattactcgattatttacccgacgatgcattaatgattattgatgaatcg
cacgtaactgtctcgcaaattggcgctatgtataaaggcgatagaagtcgtaaagaaaac
ctcgttgaatacggttttagaatgccctcggccatggataaccgtccactgcgttttgaa
gaatttgaagccattgcaccgcaaactatttatgtgtcggccacaccgggtgattttgaa
ttagagcgcagcaatggcgaggttgctgaacaagttattcgtccaaccggcttacttgac
ccattaatagaagtgcgcccggttggcgatcaggttgatgacttactctcagaaatttat
aaaagtgttgaaaaaggcgagcgcgtgttagtaacaacactgaccaaacgcatggctgag
gatttaactgattatttaagcgaacataatgtaaaagtacgctatttacactctgacata
gacaccgtagagcgggtcgaaattattcgtgatttacgtgccggtgtgtttgatgtgtta
gtaggcattaacttactacgtgaaggtttagatatgccagaagtggcattagtagctatt
ttagatgccgataaagaaggctttttacgctcagctcgctcgcttattcaaaccataggc
cgtgctgcgcgccaccttgatggtcgtgctattttatacggtgatagaatcactaagtcg
atggccaaagccattgatgaaacccagcgacgccgcgatatacagcatgcttataatgtt
aagcacggtattgagcctaaagcactgatcaaaaagatactcgatgtaatggatgtaggt
gaagatgcttcaccacaagataacttacagcttattcgtaaagagtctaaaaaaattctt
agtgcgaaagaaattgccacgcaaattaagcagcttgaaaccaaaatgcatgcctacgcc
agtgatttagaatttgaaaaagccgcctctgtacgcgatgaaatacatgaactacaacaa
cagttgattaattaa
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