Pseudoalteromonas sp. SM9913: PSM_A1964
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Entry
PSM_A1964 CDS
T01374
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm00541
Biosynthesis of various nucleotide sugars
psm01100
Metabolic pathways
psm01250
Biosynthesis of nucleotide sugars
Module
psm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSM_A1964 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psm01005
]
PSM_A1964 (kdsA)
Enzymes [BR:
psm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PSM_A1964 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
psm01005
]
Lipid A
PSM_A1964 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADT68888
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Position
I:complement(2108719..2109573)
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AA seq
284 aa
AA seq
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MNNQVININEIELANNKPFVLFGGMNVLESRDLAMRIAEHYVEVTTKLNIPYVFKASFDK
ANRSSINSYRGPGMEEGLKIFEEIKNTFNIPLITDVHEPHQAAPVAEVVDVIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNNNVALCERGSSFGYNNLVVD
MLGMDDMKTMAPVIFDATHALQRPGGRADSADGRRAQAAELARSGMALGIAGLFIEAHPN
PNEAKCDGPCALALSKLEGYLSQMKAVDDLIKSFAPLDTSASDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaagttattaatatcaatgaaatagaactggcaaataataaaccttttgtt
ttatttggtggcatgaatgtgcttgaatcacgcgacttagcgatgcgtattgccgagcat
tatgttgaagtgaccactaaattaaatattccttatgtatttaaggcgtcatttgataaa
gccaatcgctcgtccatcaattcttaccgtggtccaggcatggaagaaggcttaaagata
tttgaagagattaaaaatacctttaatattccgcttatcaccgatgtacatgaacctcat
caagcagcaccggttgcagaggttgttgatgttattcagctaccggcgtttttggctcgt
caaacagacttggtggttgcaatggctaaaacaggcgcgattattaatgtgaaaaagcca
cagtttttagctccgcatgaaatgcgtcatatcattactaaatttaatgaagccggaaat
aataatgtggccttatgtgaacgtggttcaagctttggctataataacctagtggttgat
atgctaggtatggatgatatgaaaaccatggctcccgttatatttgatgcaactcatgca
ctgcagcgtcctggcggtcgagcagactcagccgatggtcgtcgtgcccaagctgccgaa
cttgctcgtagcggcatggctcttggtatcgcaggcttatttattgaagcgcaccccaat
ccaaatgaagcaaaatgtgatggcccctgtgcattagcattgagcaagttagaagggtac
ttatcgcaaatgaaagcggtggatgatttaatcaagagctttgcccctcttgataccagt
gctagcgatttataa
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