Pseudoalteromonas sp. SM9913: PSM_A2027
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Entry
PSM_A2027 CDS
T01374
Symbol
yejH
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A2027 (yejH)
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PSM_A2027 (yejH)
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
ERCC3_RAD25_C
AAA_22
AAA
AAA_30
ATPase_2
zf-tcix
TniB
UTRA
DZR
AAA_16
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ADT68950
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Position
I:complement(2167246..2168997)
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AA seq
583 aa
AA seq
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MTYTLRPYQSEAVERTVLHFRKTNDPAVIVLPTGAGKSLVIAELARIAKQKILVLAHVKE
LVEQNAQKYKSFGLEASIFSAGLKEKSLTHQVTFASVQSLSRNLDKLNEHYSLLIIDECH
RVNGEKKSQYGKVINALKSHNPELKVLGLTATPYRLGLGWIYQHHYHGFVRGNKESPFKH
CIFELPLRYMIKHNYLTPPKEVDAAISHYDFSSLTSNAFGQYSNEDMNALLKKSTRATQT
ILQQVIQYSENRYGVMIFAATVMHAQEIMTYLPEDHSALITGDTPNSERDKIIKQFKAKQ
LKYLVNISVLTTGFDAPHVDFIAILRPTESVSLYQQIVGRGLRLAEGKDDCLVIDYAGNG
FDLFYPEVGDKKGDSDNEPVQVLCPGCGFANIFWGKTDADGKVIEHFGRRCKGLLEDDNG
LSDQCDYRFRFKECEQCGAQNDIAARKCHDCDAVMADPDDKLRNALNLKDALVLRCSGLS
VVKLKEQLLKITYFDEDGASCDEIFDLSNKGVRYYFNQQFGKRISQGQSPIEFVSAEQVI
KAQFDLIPPDFVIARKSKKYGWKVADKLFDYKGSFRKANQLSR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacctacacccttagaccctaccagagcgaggcggttgaacgcaccgttttacacttt
agaaaaaccaatgatcctgctgtcattgtgctgcctacaggtgcgggtaaaagtttagtg
attgctgaacttgcgcgtatcgctaaacaaaaaatattggtgttggcgcacgtaaaagaa
ttagttgagcaaaatgctcaaaagtataaaagctttggtcttgaggcaagtatattttca
gccggattaaaagagaagtcgttaacccatcaggtcacttttgcgagtgtgcagtcgtta
tcgcgtaatttagacaaacttaatgagcactactcactacttattattgatgagtgccac
agagtgaatggcgaaaagaaaagccaatacggtaaggttattaatgcacttaaatctcac
aaccctgaattaaaagtattaggtttaaccgcgacgccttaccgactagggttaggctgg
atttatcagcatcattaccatgggtttgtaagaggcaataaagagagtccattcaaacac
tgtatttttgaattacctttgcgctatatgatcaagcataactatttaactccccctaaa
gaggttgatgctgcgattagccattatgacttttcatctttaactagcaatgcatttggg
caatatagcaatgaggatatgaatgcgctgttaaaaaaatcgacccgtgcaactcaaaca
attttacaacaggttatacaatacagtgaaaatcgttacggcgtgatgatttttgcagct
acggttatgcatgcacaagagataatgacttatctaccagaggatcacagtgcgctgatc
acgggggatacgccaaatagcgaacgcgataaaataataaagcagtttaaagctaaacag
ttaaaatatttagtaaatatatcagtactgacgacgggttttgatgcccctcatgttgat
tttattgctattttacggcccacagagtcggtaagtttataccagcaaattgtcggtaga
ggcttgaggttggctgagggtaaagatgattgtttagtgattgactatgcgggcaatggc
tttgatttattctacccagaggtgggagataaaaaaggcgatagcgataatgaacccgtg
caagtactgtgtcctgggtgtggctttgccaatatattttggggaaaaacagatgctgat
ggcaaagtaatcgagcacttcggcaggcgttgtaaaggtttgctagaagatgataacggt
ttaagcgatcaatgcgattatcgttttcgttttaaagagtgtgagcagtgcggcgcacaa
aatgatattgctgctcgaaaatgccatgattgtgatgctgtgatggccgaccctgatgat
aagttgcgcaatgcgttaaaccttaaagatgcattagtcctacgttgtagcggcttgagt
gtggtaaaacttaaagagcaattgttaaaaattacttattttgatgaagacggagccagt
tgtgatgaaatttttgatttatcaaacaaaggtgttcggtattactttaatcagcagttt
ggtaagcgtataagtcagggccaatccccgattgaatttgtcagtgcagagcaagttata
aaagcgcagtttgatttaataccaccggattttgtgattgcgcgaaaaagtaaaaaatat
ggctggaaagtagcagataaactttttgattataaaggcagcttcagaaaagcaaaccag
ctaagtcgatag
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