KEGG   Pseudoalteromonas sp. SM9913: PSM_A2335
Entry
PSM_A2335         CDS       T01374                                 
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psm  Pseudoalteromonas sp. SM9913
Pathway
psm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PSM_A2335 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psm03019]
    PSM_A2335 (rnc)
   03009 Ribosome biogenesis [BR:psm03009]
    PSM_A2335 (rnc)
   03036 Chromosome and associated proteins [BR:psm03036]
    PSM_A2335 (rnc)
Enzymes [BR:psm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PSM_A2335 (rnc)
Messenger RNA biogenesis [BR:psm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PSM_A2335 (rnc)
Ribosome biogenesis [BR:psm03009]
 Eukaryotic type
  90S particles
   RNase
    PSM_A2335 (rnc)
 Prokaryotic type
  rRNA processing factors
   PSM_A2335 (rnc)
Chromosome and associated proteins [BR:psm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PSM_A2335 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: ADT69249
LinkDB
Position
I:complement(2488022..2488699)
AA seq 225 aa
MKKNVTELYKRIGYTFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFP
KAREGDLSRMRSTLVRGQTLAEFGLEFELGDYLRLGPGELKSGGFRRESTLADAVEAIIG
AVFLDSDIDRCGELILAWYESRLDAISPGLNQKDPKTLLQEYLQARKLSLPGYTVVDTKG
QAHNQTFTVECIVDGMDSIISVGSSRRKAEQKAAEKALKILKNES
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaaaaaaaatgtaacagagttatacaaaagaattggctacacatttgctgatcaaggg
ttacttgagcaagcaatgacgcatcgcagccacaaaggtcaacataacgagcgactcgaa
tttttgggcgactcaattttgagctttgtcattgccaatgcgctgtacgctaaatttcct
aaagcacgcgaaggcgatttaagccgcatgcgttcgactttagttcgcggtcagacgtta
gctgaatttggccttgaatttgagctaggtgattacctacgcttaggtcctggcgagcta
aaaagtggtggttttagacgcgagtcaaccctagcggatgcagttgaagctattattggc
gctgtatttttagattcagacatagatcgctgcggcgagcttattttagcgtggtatgaa
tcacgtttagatgctatttcaccagggcttaaccaaaaagatcctaagaccctgctgcaa
gagtatttgcaagctcgtaagctatcattaccaggctacaccgtagttgatactaaaggt
caggcacacaatcaaacattcacggttgaatgtatcgttgatggaatggatagcattatt
tctgttggcagctcacggcgtaaagccgaacaaaaagcggccgaaaaagcattgaagata
cttaaaaatgaatcttga

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