Pseudoalteromonas sp. SM9913: PSM_A2375
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Entry
PSM_A2375 CDS
T01374
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psm03016
]
PSM_A2375 (truD)
Enzymes [BR:
psm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PSM_A2375 (truD)
Transfer RNA biogenesis [BR:
psm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSM_A2375 (truD)
Prokaryotic type
PSM_A2375 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADT69289
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All DBs
Position
I:complement(2529504..2530553)
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AA seq
349 aa
AA seq
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MSELNYLYGAPLSKADFKTTAEDFMVDEDLGIEFTGSGEHVCLQVVKKGENTQYVAKLIA
QKAGVSPRDVSYAGMKDRHGVCSQWFSVKVPIKKHIDFTELNSESVFVVSQQRHERKLRT
GCHKGNRFTITLRNVTEPLDILCRINAVRAGVPNYFGEQRFGRDGHNLVMAEKMFAGERI
RDKKLRGIIISAARSHVFNQIVSLRVAEHGLAKTMHREVFMLSGSNAFFEDAISDENIAR
LASGDIMMSAPMVGKSEKGLTEQEKTWLAPYQAWCDGLGELGLKNERRMLRLIPQDLSVE
TLDERTLKLSFGLPKGCFATALLRELVDYTDASPRERKEKDNADEDSIK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattaaattatttatatggcgcgccgctttccaaagccgactttaaaaccacc
gcagaagactttatggttgatgaggatctcggtatagagtttaccggcagtggtgaacac
gtgtgtttgcaagtggttaaaaagggtgaaaacacccaatatgttgccaagctgattgca
caaaaagcgggtgtatcgccacgtgatgtaagctatgccggtatgaaagaccgccatgga
gtatgctcgcagtggtttagcgtaaaagtaccgattaaaaagcatattgattttactgag
ctgaacagtgaaagcgtgtttgtggtatcgcagcagcgccatgagcgaaaattgcgcact
ggttgccataaaggaaatagatttactattaccttgcgcaatgtaaccgagccgcttgat
attttatgccgtataaacgcggtacgcgcaggtgtgcctaattattttggtgaacagcgc
tttggccgtgatggacacaacctagtgatggccgaaaagatgtttgccggtgagcgtatt
cgcgataaaaagctgcgaggcattattatttctgctgcgcgttcacatgtgtttaatcaa
attgttagtttacgcgtggctgagcatggccttgctaaaaccatgcaccgcgaagtattt
atgctcagtggcagtaatgcattttttgaagatgcgataagtgatgaaaatattgcacgg
cttgcttctggcgatattatgatgtcggcgcccatggtgggcaaaagtgaaaaaggctta
accgaacaagaaaaaacatggttggcaccgtatcaagcatggtgtgatggcttaggtgag
ttagggcttaaaaacgagcgcagaatgctgcgtttaatcccccaagatctaagtgtagaa
acacttgatgaacgcacattaaaactcagctttggtttacccaaaggctgctttgcaacg
gctttactgcgcgaactggttgattatactgacgccagtcctcgcgagcgaaaagaaaag
gataacgcagatgaagattctattaagtaa
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