Pseudoalteromonas sp. SM9913: PSM_A2456
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Entry
PSM_A2456 CDS
T01374
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSM_A2456 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psm03019
]
PSM_A2456 (pcnB)
Enzymes [BR:
psm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PSM_A2456 (pcnB)
Messenger RNA biogenesis [BR:
psm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSM_A2456 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADT69370
LinkDB
All DBs
Position
I:2616748..2618049
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AA seq
433 aa
AA seq
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MVIPRGEHGISRKQFSPNAIKVLYRLKDGGYDAYLVGGCIRDVLLGQQPKDFDVVTNATP
EQVKKLFRNCRLIGRRFRLAHIVFGREIIEVATMRGHHEAQEDKNQISQSSEHGQLLRDN
VFGSIEEDAERRDFSINALYYSINDFCIYDYANGLAAIKAKQIELIGDPETRYREDPVRM
LRAVRFATKLDMQIAPASEKPITALASLLDNIPPARLFEEILKLFLNGKAQQNFLMLRKY
GLFKSLFPELDRILDKNPGGLEETFIKQMFANTDIRINAEKKVTPAFVFAALLWFPLVER
TEKIRRQEQLSEYDAFAQAINKVLSENAQHIAVPKRFTLGARDIWHIQQRLDKRAGQRAY
RLTQQPRFKAAYDFLLLRVDAGETEHTELAQWWTQYLSQDINGQKEMVRELGHQGGPKPR
KRPRRRTTKKPAE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatccctcgaggtgagcatggtatttctcgcaaacaatttagcccaaatgcaatc
aaagtactctatcgcctaaaagatggtggctatgatgcctacttagttggtggttgcatt
cgcgatgtattgttaggtcaacaacccaaagattttgatgttgtaaccaatgcaacccct
gagcaagttaaaaaactgtttcgtaactgccgtttaattggccgccgctttcgtttagcg
cacattgtttttggtcgtgagattattgaagtggccaccatgcgcggccatcacgaagca
caagaagacaaaaatcaaattagccaatcaagcgaacatgggcaactacttcgcgacaac
gtatttggcagcattgaagaagatgccgagcgtcgtgatttttcaatcaatgccttatat
tactcaatcaatgatttttgtatttatgattacgccaatggtttagcggccataaaggca
aaacaaattgagttaattggcgaccctgaaacacgctatcgtgaagaccccgtgcgtatg
cttcgtgcagtgcgctttgctactaaactcgatatgcaaatagcacctgcaagcgaaaag
ccaataaccgctctagctagcttgcttgataacattccaccggcacgtttgtttgaagaa
atactcaagctgtttttaaacggcaaagcacaacaaaactttttaatgctgcgcaaatac
gggttatttaaatcgttgttcccagaacttgaccgcattttggataaaaacccaggcggg
cttgaagaaactttcatcaagcaaatgtttgcaaacactgacatccgcattaatgcagag
aaaaaagtcacccctgcgtttgtatttgcagcgttactgtggtttccattggttgaacgt
actgaaaaaattcgacgtcaagaacaactctctgaatacgatgcctttgcccaagcaatt
aataaagtacttagtgagaacgctcagcatattgcagtaccaaaacgctttacgttaggc
gcccgtgatatttggcatattcaacaacgtttagacaaacgtgcaggccaacgtgcctat
cgcttaacacagcagcctcgttttaaagccgcttatgactttttattactgcgtgttgat
gccggtgaaactgagcatacagagcttgcacagtggtggacacagtacttgagtcaagat
attaatggccaaaaagaaatggtgcgagagctaggtcatcaaggtggaccaaaaccacgt
aagcgtcctcgtcggcgcaccactaaaaaaccagctgagtaa
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