Pseudoalteromonas sp. SM9913: PSM_A2553
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Entry
PSM_A2553 CDS
T01374
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSM_A2553 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psm03019
]
PSM_A2553 (recQ)
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A2553 (recQ)
Enzymes [BR:
psm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSM_A2553 (recQ)
Messenger RNA biogenesis [BR:
psm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSM_A2553 (recQ)
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSM_A2553 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
HEM4
Motif
Other DBs
NCBI-ProteinID:
ADT69467
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All DBs
Position
I:2724371..2726194
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AA seq
607 aa
AA seq
DB search
MNTLTPSPNTLVRKPETVLKQVFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQ
IPALVLEGVTIVISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGLIKL
LYVAPEKVLQRDFLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMM
ALTATADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREPCGNCDICLNPPKSFDGTLVAQQ
ALSCVYRAQQQFGLGYIVELLRGANTSRIRDNNHHELSTYGIGKDKSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYDKKLFARL
RALRKELADADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEFLTAI
RHYLATQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactaactccttctcctaatacgcttgtgcgtaaacccgaaactgtactcaaa
caagtgtttggttacagtgaatttcgcgacggtcaaagtgcagtaattgatgccgccatt
aatggccaagattcattagtattactgcccaccggtggtggtaaatcggtgtgttaccaa
atacccgcgctggtattagagggagtcaccattgttatttctccgctgatctctttaatg
caagatcaagtcacccaattacaagcactgggagttaaggccgcttatgtcaataacagc
ctagctcgcgaagaacaacaattagtgtatcagcaattgcatcaagggctgataaagcta
ctttatgtagctcctgaaaaagtgctacaacgcgactttttagagcggctctctcatttg
aatgttagcttgtttgctattgatgaagcacactgtgtttctcattggggtcacgatttt
agaccgcattattttcgtttaaatgagcttaaacaacgctttgcacatgtgcctatgatg
gcactcactgccactgccgataaagcgactcgctttgatattgttgagcaactcaagcta
caacagccctacattcataccggcagttttgatcgccctaatattcgttacaccatagaa
gaaaaatttaaacctatggtgcaattactgcgttatttaaaagagcaaaaaaatcaaagt
ggtattatttattgcaccagtcgtaaacgtgttgatgatatagctgaaaagcttgctgat
gcaggccttaatgctgccgcttaccatgcgggaatgagtaacgagcaacgtcagtttgtg
caaaccgggtttgcccgtgacgatattcaaattgtggttgccaccgttgcctttggtatg
ggaattaacaagcctaacgtacgctttgttctgcattacgacattccaaaaagtattgaa
gcttattaccaagaaacaggccgtgctggacgagatgggcttgctgcagaggccatcatg
tattttgaccctgccgatataggtcgggttagacgcttttttgaagatattgacgatgaa
caacgccgccgcgtagaggagcagcgctttaatgccatggccagctttgccgaagcacaa
acgtgtcgccgtcaaatattattgaactactttagtgagtaccaacgcgaaccctgtggt
aactgtgacatttgcttaaatccacctaaaagttttgatggcacattggtcgcacagcaa
gcactttcgtgtgtgtatcgcgcacagcaacaatttgggttaggttacattgtagaatta
ttacgtggcgcgaatactagccgcattcgtgataacaaccaccatgaactcagcacctat
ggcataggtaaagataaaagcagtgagttttggctcagtattttacgccaacttattcat
caagggctattaagccaagatataacccaaggcgcttcattgcgtttaactgaagctgca
cgcgctattttaaaaggtgaatatgcactgcaattggccgagcctcgcttacaagctaaa
cacgtttatcaggataagttagcgcagtttaattacgataaaaaactattcgctcgcctg
cgtgcattgcgtaaagagttagccgatgccgatgatgtgccgccttatgtagtctttaac
gataaaacgctagccgaaatggcgcagcttatgcccactaacgacagtgaatttttaaaa
gtgtcgggggttggttttactaaattaaacaagtatggcggtgagtttttaaccgcaatt
cgacattacctagcaacgcaataa
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