Pseudoalteromonas sp. SM9913: PSM_B0054
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Entry
PSM_B0054 CDS
T01374
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_B0054
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSM_B0054
Archaeal homologous recombinant proteins
PSM_B0054
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ADT70094
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Position
II:complement(59582..60829)
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRRHEHHAFFSWLLTTLVNQQIDLLLVAGDIYHTATPSANAE
NQLYQFIKNAKAQCPQLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFDPAKPSDVVI
TINNDDKRAVVLAMPFLRTSDISTLSQTENGPSYAQGVAKAYELALEHALTLNAENTPLI
VMGHLHAKGGNISGDSERNLVIGGEEAISASVFGKQANYVALGHLHKAQLVAKNEQIRYS
GTPIPMSFSERKYTHQVNVVEFSEQKNQPLNTAVNPLYIPRLAEVIVLPEGECVPLAQLC
EQIKALDTEQYDIAPYLRVKLKSSDIDTTFREQIEQALKGKQVNFCGIERVRDQQMSNSS
ETVFEDLSFVEMLNPISLLEQAFNNDKDMAAATVPNELKALLTDVIEELEQEQLL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcttcacacttcagactggcacctaggtcagcaattttatgaacatgatcgc
cgtcatgaacaccatgcttttttctcttggctgttaaccaccctcgttaaccaacaaatc
gatttattgcttgttgcaggtgacatttatcatactgccacaccgagtgctaacgccgaa
aaccaactctatcaatttataaaaaacgccaaagcccagtgcccacaattacacgttgtt
attattgcgggtaatcatgactccgctaatcgtattttggctgcacagcccttattagcc
cagtttgatactcatgtggtagggcggtttgatcctgctaaacccagtgacgttgtaata
acgattaataacgatgataaacgcgctgtggtactcgctatgccttttttacgcaccagt
gacataagcacgcttagccaaaccgaaaatggccccagttacgcacagggcgttgcaaaa
gcctatgaacttgctcttgaacatgcgctaacacttaacgctgaaaatacgcctttaatt
gttatgggtcatttgcatgcaaaaggcggtaatatttccggtgactctgaacgtaatttg
gtcattggcggtgaagaagctatttcagcgtcggtatttggtaagcaagccaattacgtc
gcactaggccacttacataaagcacaactagtggctaaaaatgagcaaatacgttacagc
ggcacacctattccaatgtcgttttcagaaagaaagtatacccatcaagtaaatgtggtt
gaatttagcgagcaaaaaaaccaaccgttaaacaccgctgtaaaccccctttacattccg
cgcttagcagaagtcattgtacttcctgaaggagagtgtgtgcctttagcgcagctgtgt
gagcaaataaaagcactcgatacagagcaatacgacattgctccttacttacgagtaaaa
cttaaatcaagtgatatcgataccacctttcgagaacaaattgagcaagcacttaaagga
aaacaggttaatttttgtggcatagagcgagttcgtgaccagcaaatgagtaattcctca
gaaacggtatttgaagatttaagctttgttgaaatgctcaacccaattagcttactcgaa
caagcatttaataatgataaagatatggccgcagcaaccgtgcccaatgaattaaaagca
ctgttaaccgacgtaattgaagaacttgaacaggagcaactgctatga
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