Pseudoalteromonas sp. SM9913: PSM_B0161
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Entry
PSM_B0161 CDS
T01374
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psm03000
]
PSM_B0161
Transcription factors [BR:
psm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSM_B0161
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADT70201
LinkDB
All DBs
Position
II:182386..183264
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AA seq
292 aa
AA seq
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MSRLNYHHLYYFWSVARIGNLTQAAKELHLSQSALSTQIKQLEHTINIQLFERKGRTLAL
TDMGKRVQMYANDIFTKGEELSSFIHKGMISQTQHLSIGVLNTLSRNFIEEFINPLMSND
EVRFSLTAGRMDGLLNGLAEHELDLVLTNKPIGLEHYDQLWQSQLVSRQPLAIVGPADKK
TRGQFPTGYTDAQWVLPSKTSAIRDSFNALCARWQYQPKIKAEADDMAMLRLLARDSGAL
SVLPSVVVKDEIEQGLLVEYQRLPDAFEHFYAITAQRKFVPDILKSLLAKTC
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttgaactaccatcacttgtattatttttggtctgttgcccgaattggtaac
ttaacccaagcagctaaagagctgcatttatcgcagtcagcgctctccactcaaattaaa
cagctagagcacaccattaatattcagttatttgaacgtaaaggacgtaccttggcatta
accgatatgggaaagcgggtgcaaatgtacgctaacgatatattcactaagggcgaagaa
ctgtcgtcttttattcataaagggatgatttcccaaactcagcatttatcaatcggggtg
cttaatacgctctctcgtaactttatcgaggaatttattaaccctttaatgagtaacgac
gaagtacgcttttcgcttactgcagggcgtatggatgggctattaaatggtttggcagag
cacgaactggatttagttttaaccaataaacccatcggacttgagcactacgatcaactg
tggcaaagccagttggtatctcgtcagccattagccatagtgggccctgcagataaaaaa
acacgcggtcaatttcctaccggttacacagatgcacaatgggtgctacccagtaaaacc
tccgcgattagagactcatttaatgctttgtgtgcccgctggcaatatcagccaaaaata
aaagcagaggctgatgatatggctatgctgcgattacttgctcgtgatagtggtgcacta
tcggtattgccatcagttgtagtaaaggatgaaatagaacaaggcctattagttgaatac
caacgtttacctgatgcatttgagcacttttatgccattaccgcacagcgcaaatttgta
cctgatatactcaaatcattgctcgccaaaacgtgttaa
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