Pseudoalteromonas sp. SM9913: PSM_B0529
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Entry
PSM_B0529 CDS
T01374
Name
(GenBank) putative deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_B0529
Enzymes [BR:
psm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSM_B0529
DNA repair and recombination proteins [BR:
psm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSM_B0529
Prokaryotic type
PSM_B0529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADT70566
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All DBs
Position
II:584105..585499
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AA seq
464 aa
AA seq
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MNTLFWFRRDLRLFSNEALIEALNNGAKHTIFFVCEKQWAQHNTAPIQIDLLKRRVSYIR
EKLAEYGINLHVIEAPYFTDCQTKLLDFCQQYEIKHIIANKEYELNEFNRDKAIQAQCDQ
QQITFTLYEGDIIAPVGSVRTQNNEMYKVFTPFKRAWLKQYQDTHFSLVSWPLSSNPIDI
ESCELLSSDDSSKKWPVDDDTLASVVDNFIHDKLASYDDVRDIPSVKGTSGLSPYLALGV
VSSKQLMVNIQQQYPDILTTSKSKTFTWVNELIWREFYKHLIAEFPKLSRGANFNEKYDS
VAWRDNEAEFKLWCEGRTGYPLVDAAMQQLLQTGWMHNRLRMVVASFLTKHLLIDWRKGE
QFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPITQSERFDPSGQFIRKYLPELE
KVPDKHIHFPHTYLAATGQSEHCYWPAIVDHKAARARALDAFKV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactattttggtttaggcgtgatttgcgccttttttcaaacgaagcgcttatt
gaagcgttaaataatggtgctaaacacaccattttttttgtgtgcgaaaaacaatgggca
cagcataacactgccccaattcaaattgatttactaaaacgcagagtcagttacatacgt
gaaaaattagctgagtatggcattaatttacacgtgatagaggctccttatttcacagac
tgccaaactaagcttctcgatttttgtcagcagtatgagattaaacacataatagccaat
aaagaatatgagcttaatgagtttaatagagataaagcgattcaagcgcaatgcgatcaa
cagcaaataacatttactttatacgaaggtgacatcattgcacctgttggcagtgtacgc
actcaaaacaatgaaatgtataaagtgtttacgccttttaagcgggcgtggttaaaacag
tatcaagatactcactttagcttggtgtcgtggccattatcttcaaaccctattgatatt
gaatcgtgtgaattactcagcagtgatgacagttcaaagaaatggccggttgatgacgac
accttagcgagtgtggtcgataattttatccatgataaattagcaagttatgatgatgta
cgcgatatacctagtgtaaaaggaacatcgggtttaagcccatatttagcattaggggtt
gttagcagtaagcagttaatggtcaacatacaacagcagtatccagatattttgactacc
tcaaaaagtaaaacctttacgtgggtgaacgagctgatttggcgtgaattttataaacac
ctcattgccgaatttcctaaattatcgcgcggtgctaatttcaacgaaaagtacgatagt
gttgcttggcgtgataatgaggctgagtttaagctttggtgtgaaggccgcactggctat
ccacttgttgatgctgccatgcaacagctattgcaaactggttggatgcacaaccgtttg
cgaatggtagtggcaagtttcttaactaaacatcttttaatcgactggcgtaagggcgag
cagttttttatgcagcaccttattgatggtgatttagcctcgaataatggcggctggcaa
tgggcggcaagtacaggctgtgatgcacagccttattttagagtgtttaaccctattact
caaagtgaacgctttgatccaagtggtcaatttattcgtaaatatctgcctgaattagaa
aaagtcccagataaacacattcattttcctcatacctatttagcagcaacggggcaaagt
gaacactgttactggccggcaattgttgatcataaagcagcacgagctagggctttagat
gcatttaaggtgtga
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