Pseudoalteromonas sp. MT33b: H3302_00015
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Entry
H3302_00015 CDS
T10969
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3302_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmb03400
]
H3302_00015 (recF)
DNA repair and recombination proteins [BR:
psmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H3302_00015 (recF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_13
ATPase_2
AAA_27
AAA_29
ABC_tran
DUF2813
AAA
NACHT
AAA_16
Bac_DnaA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QMW14555
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Position
1:2513..3607
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AA seq
364 aa
AA seq
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MSLSHLSLNNFRNIEALTLEPINGINIIYGENGSGKTSLLEAIYFLSHGKSFRTAKHKSI
IQHQQDKFVIHGRKALHDLSIPVGISKNQAGETSLKIQGKTSRKISELAQLIPVQVITPE
SYSLFFGGPKERRKFLDLGLFHVEHDFFYLWQSFNKVLKQRNALLKSKPRNYFEQIKFWD
KEFVRLAEQINNLRIAYISRFKQQFFDKMCAELTLIRDLEISFNAGWKESESLSEALKQS
FERDAKQGFTSKGPHKADFSFSVSGNSVENTFSRGQLKLLLYALKVTQNSLIESETDKQS
ILLIDDLPSELGEDTKEKVGQLLSHCDSQLFISSILSESISAVVEPMQRELKMFHVKHGN
LITR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagtcatttaagcctcaataattttcgtaatattgaggcgctgacacttgag
ccgataaatggaattaatattatttatggcgaaaatggcagcggaaaaaccagcctttta
gaggctatttatttcctttcacatggtaaatcatttcgaaccgccaagcataaaagtatc
attcaacatcagcaagacaagtttgttattcatggtcgtaaggcattacatgacttgtcg
attccggttggtataagtaaaaaccaagcgggtgaaacatcattaaagattcagggtaaa
acgagtcgaaagatctcagagttggcgcagctaattcctgtgcaagtgattacacctgaa
agctattctttattttttggtggaccaaaagagcgtagaaaatttttagatttaggattg
ttccacgtggaacatgactttttttatttatggcaatcattcaataaagtattaaaacaa
cgtaatgcattgctgaagagtaaacctaggaattatttcgagcagatcaagttttgggac
aaagaatttgttagactagcagaacaaataaataatttaagaatcgcgtatataagtagg
tttaagcagcaattttttgataaaatgtgtgcagaattaacgcttatacgcgatttagaa
attagctttaacgcgggttggaaagagagcgaatcgctctcagaggctcttaaacagagc
tttgaacgtgatgccaaacagggtttcacaagcaaaggcccgcataaagctgattttagt
tttagcgtttctggtaatagtgtggaaaatacattttcacgcggtcaattgaagctcttg
ctttatgcgttgaaagtaacgcaaaatagcttaattgaatcagaaactgataagcaatct
atattgctaatagatgacttaccttcggagttaggtgaagatacaaaggaaaaagtgggt
cagcttttatcgcattgcgattcacaactttttatctcatctattttatctgaaagtatt
tctgctgtggtggaacccatgcaacgagaactaaaaatgttccacgtgaaacatggcaac
ctaataacaagataa
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