KEGG   Pseudoalteromonas sp. MT33b: H3302_00550
Entry
H3302_00550       CDS       T10969                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psmb  Pseudoalteromonas sp. MT33b
Pathway
psmb00300  Lysine biosynthesis
psmb00470  D-Amino acid metabolism
psmb01100  Metabolic pathways
psmb01110  Biosynthesis of secondary metabolites
psmb01120  Microbial metabolism in diverse environments
psmb01230  Biosynthesis of amino acids
Module
psmb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psmb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    H3302_00550 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    H3302_00550 (dapF)
Enzymes [BR:psmb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     H3302_00550 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF DHODB_Fe-S_bind RnlA_toxin_N
Other DBs
NCBI-ProteinID: QMW14648
LinkDB
Position
1:complement(103655..104485)
AA seq 276 aa
MLVNFSKMHGLGNDFVVIDNITQNVFLSRDQIKKLADRHFGIGFDQLLMVEAPYSPDLDF
HYRIFNADGNEVEQCGNGARCFARFVRMKGLTNKHKITVSTKSGNLTLYIEKDGQVTVNM
GHPVFEPNKIPLKASKRELTYIIRTEEHTIFSGAVSMGNPHCVLEVDDIQTAEVATLGPL
LENHERFPQRANVGFMQVISQDHIKLRVWERGVNETLACGTGACAAVVIGQIQSKLASTV
QVDLPGGSLQVRWQGEGHPVRMTGPAEHVFDGQVAL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgttagttaatttctcaaaaatgcacggcctaggtaacgactttgttgttattgataac
atcacgcagaatgttttcttgtcacgtgatcaaataaagaaactggcagatcgccacttt
ggtatcggcttcgatcaattacttatggttgaagccccttactctcctgatttagatttt
cactatcgtatttttaatgctgacggcaacgaagtggaacaatgtggcaatggtgctcgc
tgttttgcgcgttttgtgcgcatgaaaggcttgaccaacaaacataaaattaccgtatca
accaagtcgggaaacttaaccttatacattgaaaaagatggtcaagtaaccgtaaacatg
ggccacccagtctttgagccaaacaaaattcctctcaaggcaagtaaacgcgagttaact
tacattattcgcactgaagagcacaccatttttagcggtgccgtgtcgatggggaatccg
cactgcgtgttagaagtcgacgacattcaaaccgcagaagtcgcaaccttaggcccacta
cttgaaaaccatgaacgctttccacagcgcgcaaatgtaggatttatgcaggttatttca
caagaccacataaaactaagagtgtgggagcgaggcgtaaatgaaacattagcctgtggt
acaggggcgtgcgcagcggtggtgattggtcaaatacaaagtaaactggcaagcactgta
caagttgacttaccaggaggaagcttacaagtgcgctggcaaggtgaaggtcatccagta
agaatgacagggcctgcagagcatgtattcgacggacaagtggcattatga

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