Pseudoalteromonas sp. MT33b: H3302_00550
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Entry
H3302_00550 CDS
T10969
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb00300
Lysine biosynthesis
psmb00470
D-Amino acid metabolism
psmb01100
Metabolic pathways
psmb01110
Biosynthesis of secondary metabolites
psmb01120
Microbial metabolism in diverse environments
psmb01230
Biosynthesis of amino acids
Module
psmb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3302_00550 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H3302_00550 (dapF)
Enzymes [BR:
psmb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
H3302_00550 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DHODB_Fe-S_bind
RnlA_toxin_N
Motif
Other DBs
NCBI-ProteinID:
QMW14648
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All DBs
Position
1:complement(103655..104485)
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AA seq
276 aa
AA seq
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MLVNFSKMHGLGNDFVVIDNITQNVFLSRDQIKKLADRHFGIGFDQLLMVEAPYSPDLDF
HYRIFNADGNEVEQCGNGARCFARFVRMKGLTNKHKITVSTKSGNLTLYIEKDGQVTVNM
GHPVFEPNKIPLKASKRELTYIIRTEEHTIFSGAVSMGNPHCVLEVDDIQTAEVATLGPL
LENHERFPQRANVGFMQVISQDHIKLRVWERGVNETLACGTGACAAVVIGQIQSKLASTV
QVDLPGGSLQVRWQGEGHPVRMTGPAEHVFDGQVAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttagttaatttctcaaaaatgcacggcctaggtaacgactttgttgttattgataac
atcacgcagaatgttttcttgtcacgtgatcaaataaagaaactggcagatcgccacttt
ggtatcggcttcgatcaattacttatggttgaagccccttactctcctgatttagatttt
cactatcgtatttttaatgctgacggcaacgaagtggaacaatgtggcaatggtgctcgc
tgttttgcgcgttttgtgcgcatgaaaggcttgaccaacaaacataaaattaccgtatca
accaagtcgggaaacttaaccttatacattgaaaaagatggtcaagtaaccgtaaacatg
ggccacccagtctttgagccaaacaaaattcctctcaaggcaagtaaacgcgagttaact
tacattattcgcactgaagagcacaccatttttagcggtgccgtgtcgatggggaatccg
cactgcgtgttagaagtcgacgacattcaaaccgcagaagtcgcaaccttaggcccacta
cttgaaaaccatgaacgctttccacagcgcgcaaatgtaggatttatgcaggttatttca
caagaccacataaaactaagagtgtgggagcgaggcgtaaatgaaacattagcctgtggt
acaggggcgtgcgcagcggtggtgattggtcaaatacaaagtaaactggcaagcactgta
caagttgacttaccaggaggaagcttacaagtgcgctggcaaggtgaaggtcatccagta
agaatgacagggcctgcagagcatgtattcgacggacaagtggcattatga
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