Pseudoalteromonas sp. MT33b: H3302_00555
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Entry
H3302_00555 CDS
T10969
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb00300
Lysine biosynthesis
psmb00470
D-Amino acid metabolism
psmb01100
Metabolic pathways
psmb01110
Biosynthesis of secondary metabolites
psmb01120
Microbial metabolism in diverse environments
psmb01230
Biosynthesis of amino acids
Module
psmb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3302_00555 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H3302_00555 (lysA)
Enzymes [BR:
psmb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H3302_00555 (lysA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QMW14649
LinkDB
All DBs
Position
1:complement(104550..105803)
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AA seq
417 aa
AA seq
DB search
MDFFNYNNNQLFAEDIAVKELADQYGTPCYIYSRKTFERHYLAFAEAAKSHKSLVCYAVK
ANSNIAVLNILARLGSGFDIVSKGELARVIAAGGDASKVVFSGVAKTADEIAYALELGIK
CFNVESVAELDRISEVATSLNRVAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS
VYQYAASLPGLNITGVDCHIGSQLTEIKPFLAALEKVLTLIEELKAVNITLTHLDIGGGL
GVPYNGETPPHPSEYVDKITSRLANYQDLELIFEPGRAIAANAGILVTKVEFIKQNQDKY
FAIVDAGMNDMLRPSLYQAWQKIVPVEPREDDTPRQNYDIVGPVCETGDFLGKDRELALH
AGDLLAQRSAGAYGFTMSSNYNSRPRVAEIMVDGKQSHLIRQRETLESLWQGEKILP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttaactacaataataatcagctgttcgctgaagacatcgctgtcaaagag
cttgccgaccaatacggtacgccctgctatatctattcacgtaaaacctttgagcgccat
tatctcgctttcgccgaggcagctaaatcacacaaaagtttagtctgttacgccgttaaa
gcgaattcaaacattgctgtattaaatattttagcgcgcttaggctctggttttgacatt
gtttctaaaggcgagttagctcgcgttattgcagccggtggcgatgccagtaaagtggta
ttttctggcgttgcaaaaactgctgacgaaattgcctacgcgcttgaattggggatcaag
tgttttaacgttgagtcggttgctgagctagaccgtatatcagaagtagcaacttcacta
aaccgtgttgcacctatctcgattcgcgtgaacccggatatcgatgccaaaacacacccg
tatatctcaaccggtttaaaagaaaataaatttggcattgatattcaaacagcggtcagc
gtttatcaatatgcagcatcgcttccaggcttaaacattactggggttgactgtcacatt
ggctcacagcttacagaaattaagcctttcttagcggctctggaaaaagtgctgacctta
atcgaagaattaaaagccgtgaatatcacacttacccacctagatattggtggaggatta
ggcgtgccttataatggtgaaacaccgcctcacccaagtgaatacgttgataaaatcaca
tctcgcttagctaattatcaagacttagagcttatttttgagcccggtcgagccattgca
gctaatgcgggtattttagtgaccaaagttgagtttattaaacaaaatcaagacaaatat
tttgccattgttgatgccggtatgaacgatatgctgcgcccatctctttaccaagcatgg
caaaaaattgtgcctgtcgaaccgcgcgaagatgacacgccacgtcaaaactacgacatt
gttggcccagtgtgtgaaacgggtgactttttaggaaaagaccgtgagcttgcgctacat
gctggtgacctactggcgcaacgcagtgctggtgcatacggctttaccatgagctcaaat
tacaactcacgtccacgcgtcgctgagatcatggtcgatggcaagcaaagccacttaatc
cgccaacgtgaaaccttagaaagcctttggcaaggtgagaaaattttaccataa
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