Pseudoalteromonas sp. MT33b: H3302_01825
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Entry
H3302_01825 CDS
T10969
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb03030
DNA replication
psmb03410
Base excision repair
psmb03420
Nucleotide excision repair
psmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3302_01825 (polA)
03410 Base excision repair
H3302_01825 (polA)
03420 Nucleotide excision repair
H3302_01825 (polA)
03440 Homologous recombination
H3302_01825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmb03032
]
H3302_01825 (polA)
03400 DNA repair and recombination proteins [BR:
psmb03400
]
H3302_01825 (polA)
Enzymes [BR:
psmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3302_01825 (polA)
DNA replication proteins [BR:
psmb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H3302_01825 (polA)
DNA repair and recombination proteins [BR:
psmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H3302_01825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3302_01825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
QMW14879
LinkDB
All DBs
Position
1:389648..392383
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVVNMLKSLIRQYDPSHMVV
VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHNIIKAMGFPLISIEGVEADDVIGT
FARIASEQQRHVLISTGDKDMAQLVNEHVTLINTMTDSISDPDTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVDGCGPKTAVKWLQKYGSLQGVIDHAGEIKGKIGEKLAAALDHLPLSY
ELATIKCDVEVESDLESFKLQEPNRDELIALYGECEFRRWLAELLDNPKDADTHLDVPTE
ENELPQVSDAHYETILTEQQLDTLVKQLNEAELFAFDTETTSLDYMQAQLVGMSFAVKAG
EAAYIPVAHDYPDAPEQLTLDTVMAKIGPILADERKAKVGQNLKYDKSVLANAGFELNGI
KYDTMLESYVFNSVGSRHDMDSLALKYLGHKNISFEEIAGKGKKQLTFNQIELEKAAPYA
AEDADITLRLHEVLWPKIEADSQLKSVFEEIELPLVSVLSDIERTGVAIDSTMLAAHSQR
LGERLLELEQEAYDMAGEKFNLGSPKQLQAILFEKLELPVIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNERTKRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAAAGHKIVAADYSQIELRIMAHLSQDKGLLTAFANGLDVHSATA
AEVFGVSLEDVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDVPRHEAQHYIDKYFERFPGV
LEYMETTRQKAADKGYVETIFGRRLHLPEINARNGARRKAAERAAINAPMQGTAADIIKK
AMLKVHQWVNAQAEGAVKLLMQVHDELVFEIKEECVDEFKAEICKLMSEAATLDVPLIVE
ADSGDNWQQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccctgaaaatccacttattcttgttgatggttcttcctatttattccgc
gcatatcattcacctcctcacctaacaaactcgaaaggagaggctacaggggctatttat
ggcgtcgttaatatgcttaagagtctaatcagacaatatgatccgtcgcatatggtggtg
gtgtttgatgccaaaggtaaaacctttagaaatgatatgtacagtgaatataaagcgaat
cgtccacctatgccggatgacttacgcacacaaatagcaccacttcataatattattaag
gcgatgggttttccgcttattagtattgaaggggtcgaggctgacgatgttattggtaca
tttgcacgcattgcttctgagcaacaacgccatgtgttgatctctacaggtgataaagat
atggcgcagcttgtgaatgagcacgtcacacttattaacaccatgaccgatagtatttca
gaccctgacacggtggttgaaaagtttggtgtaggccctgaattgatcatcgactactta
gcgctgatgggcgacaaggttgataacattcctggcgttgatggttgcggccctaaaact
gcggtgaaatggttacaaaagtatggctcgttacaaggcgtaatcgatcatgccggtgag
atcaaaggcaaaataggcgaaaagctggcagctgcgcttgatcatttaccactgagttac
gaactggcaacgataaaatgtgatgtagaggttgaatctgacctagaaagcttcaagtta
caagagcctaatcgagatgagttaattgctttatacggtgagtgcgagttccgtcgctgg
ttagctgaattactcgataacccgaaagacgcagatacacatttagatgtaccaaccgaa
gaaaatgaattgccacaagtgagtgatgctcattacgaaaccattcttactgagcaacaa
cttgatacgctagttaagcagttaaatgaggctgagttatttgcctttgataccgaaaca
accagccttgattacatgcaggcacaattagttggtatgagctttgcggttaaggccggc
gaagcggcgtatattccggttgctcacgattatcccgatgcgccagaacaattaacactc
gacacggtaatggcaaaaattggcccaattttagccgacgagcgcaaagcgaaagtgggg
caaaacctaaaatacgataaaagtgtactggctaatgctgggtttgaattaaacggtata
aaatacgacacgatgttggagtcgtatgtatttaatagtgtgggcagtcgtcatgatatg
gactcgttagcacttaaatacctagggcataaaaatatcagttttgaagagattgctgga
aaaggcaaaaagcagctgacttttaatcaaattgaacttgaaaaagcagcgccatatgct
gctgaagatgctgatattacattacgcttacacgaggtgttgtggccgaagattgaagct
gatagccaacttaaatcagtatttgaagagattgagttaccgcttgtctctgtactttca
gatattgagcgtactggtgtcgcgattgacagtaccatgttagctgcccatagccagcga
ttgggtgaacgtttactcgagcttgaacaagaagcatatgacatggcgggtgaaaagttt
aacttaggctcacctaaacaactacaagcaattttatttgagaagcttgaactgccagta
attaaaaaaacgccaaaaggtgcgccatctacagcagaagaagtattgcaagagctggcg
catgattatcctttacctaaagtaatcattgagcatcgtggtttatcaaagttgaaatca
acttacacagataagctgccattaatggtgaatgagcgtaccaaacgcgtacatacctcg
tatcatcaagcggtaacggcaacagggcgtttaagttcaacagatcctaatttacaaaat
attccgatccgctcggaagaagggcgtcgtatccgtgaagcatttattgcggctgcgggc
cataaaattgtggctgccgattacagccaaattgaattacgtattatggcgcatttatcg
caagataaaggcttactgaccgcctttgccaatggcttagacgtacacagtgcaacagcg
gcagaggtctttggtgttagtctggaggacgtcaccagcgatatgcgtcgtaaagcgaaa
gctgtcaattttggcttaatttacggtatgtcggcatttggtttatctcgtcaattagat
gtgcctcgccacgaagcacagcactatattgataagtactttgagcgtttcccaggtgta
cttgaatacatggaaacgacgcgtcaaaaagcggcggataaagggtatgtagaaaccatt
tttggtcgacgcttacatttaccagagatcaatgcgcgtaatggcgcacgacgtaaagcg
gcagaacgtgctgctattaacgcgccaatgcaaggcactgccgccgatattattaaaaaa
gcaatgcttaaagtgcatcagtgggtaaatgcccaagccgaaggcgcagtgaagctactt
atgcaagtacacgatgaattagtgtttgaaattaaagaagagtgtgttgatgagttcaaa
gctgaaatctgtaagctgatgtcagaagctgcgacccttgatgtcccccttattgttgaa
gcagacagtggggataactggcagcaagctcactag
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