Pseudoalteromonas sp. MT33b: H3302_04265
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Entry
H3302_04265 CDS
T10969
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H3302_04265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmb02000
]
H3302_04265
02044 Secretion system [BR:
psmb02044
]
H3302_04265
Transporters [BR:
psmb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
H3302_04265
Secretion system [BR:
psmb02044
]
Type I secretion system
Adhesin protein transporter
H3302_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_21
AAA_13
AAA_29
AAA_23
DUF87
SpaA
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QMW15323
LinkDB
All DBs
Position
1:complement(910183..912321)
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AA seq
712 aa
AA seq
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MQENDVLDHGGSLVDCLEILCRYHDREFSRETLLSGLPLEDGLLTPSGFSRAAKRIGFKT
KVVRKALCDLNVALLPAVLILQGNEACVITKLDTQNDKVEVIYPEMPDSAVTLSLEELYK
TSTSMIIYAQPEFAFDARSPVLQKLSKDGWFWGVIKECRSLYKDVIISAIALGILSIAMP
LFVMNVYDRVVPNHATETLWVLATGVLIALTADFILRLVRSYFVELAASRIDVKVSAVIM
ERVLGMKLKNRPASAGSFASNIQSFEAVRSFFSSITLIALVDLPFVLLYLTVIAIIGVEL
SLPIIVGALLLMSYALAAHRKLESLSEQTMKASSMRNAVLVESLTNIEDVKSFHSECKTQ
SNWEKSTIFIARVNAQSRLISSSIANAGSWVQQCVGVVIMLIGVHLIIEGDLTQGGLIAA
YLLSSRTMAPISQSAAVLAQFHHAAIAMHSLNEIMEKDVERPTGKHWLSHPVLLGDIEFN
DVRFKYTDESNEALSGVSFKIKAGEKVAILGRNGSGKSTIEKLILGLYEPTAGTISIDNN
DIHQIDPAELRHNIGYVPQTISLFFGSLKDNITLSAWHAKDEQILSACQQSQLFELINSH
PDGFDMQVGEQGRLLSGGQRQAVGIARALLNNPPILLMDEPTSALDHNSETKIINNIKRS
CQEKTLIVVTHRTSLLELVDRVIVLDNGKVVADGPKSQVLSALNHQTVGKVS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaacgatgtactcgaccacggcggcagtcttgtagactgcctagaaatttta
tgccgctatcatgatcgagagttttctcgtgaaacactgcttagtgggcttccccttgag
gatggcttattaacgccatcgggtttctcgcgagcagcaaaacgtattggttttaaaacc
aaggttgtgcgcaaagcactttgcgacttaaacgttgctttgttacccgccgtattaatt
ttgcaagggaatgaggcttgcgtcattacaaaactcgacactcaaaatgataaagtcgaa
gtgatctaccccgagatgccagactctgctgtgacattaagccttgaagagctttataaa
accagtacatcgatgatcatttatgcacaacccgagtttgcctttgatgcgcgctccccc
gtactgcaaaaactgtcgaaagacggctggttttggggtgtcattaaagagtgtcgaagc
ttatacaaagatgtcattatttctgccattgctttaggcattctttccattgcaatgcca
ttgtttgtcatgaatgtttatgaccgcgttgtgcctaaccatgccactgaaacgttatgg
gtgcttgccacaggcgtactaattgcccttaccgcagactttattctcagactcgtgcgc
agttattttgtagagctggcagccagtcgtattgatgtcaaagtgtcggcagtgatcatg
gaacgcgtgttgggtatgaagttaaaaaaccgtcctgcgtcagcaggctcgtttgccagt
aatattcaatcatttgaggcagtgcgcagcttttttagctccattactttaattgccctt
gtcgatttacctttcgtactgctttacctcacagtcatcgcgattattggtgttgaatta
agcttacctattatcgttggggcactgctattaatgagttacgcgctggctgcccatcga
aaactcgagagcctctcagaacaaaccatgaaagcaagctctatgcgcaatgctgttttg
gttgaaagcttaacaaacattgaagatgtcaaaagctttcacagtgaatgtaaaacccag
tcaaactgggaaaaatcaacgatttttatagcccgagtcaatgcccaaagtcgcttaata
tcatcttctatagccaatgctggctcgtgggttcagcaatgtgttggtgtggtgattatg
ttaataggtgtacacctaattatcgaaggtgatttaacccaaggggggctaattgccgct
tacttattgtcgtcacgtactatggctcctattagtcaatctgcggctgtactcgcgcaa
tttcatcatgccgcaattgcaatgcactcgttaaatgaaatcatggaaaaagacgttgag
cgccccacaggcaaacattggttaagtcatccagtgttgcttggcgacatagaatttaac
gacgtacgctttaaatataccgatgaaagcaacgaagcgctcagtggggttagctttaaa
ataaaagccggtgaaaaagtagctattttagggcgcaatggctcagggaaaagcaccata
gaaaaactaattttaggtttgtatgagccaacggcgggcactatttcaattgataataac
gacatccaccaaatagaccccgcagagcttaggcacaacattgggtatgtgccccaaacc
atttcattattttttggttcgttaaaagacaacatcaccctcagtgcgtggcacgctaaa
gatgagcaaatactttcggcatgccagcaaagtcagttatttgaacttataaactctcac
cccgatgggttcgacatgcaagttggtgagcaaggccgattactctctgggggtcaacgt
caggcggttggtattgcccgagcactgttaaataacccgccaatactgttgatggatgaa
ccaacttcggcgcttgatcacaacagcgaaactaagatcattaataacatcaaacgcagt
tgccaagaaaaaaccttaatcgttgtaactcacagaacctcgttactcgaactggtcgac
cgtgtcattgtgctcgataacggtaaagtggttgccgatggccctaaatctcaagtgtta
tcagcgttaaatcatcaaacagtaggaaaagtatcatga
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