Pseudoalteromonas sp. MT33b: H3302_04420
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Entry
H3302_04420 CDS
T10969
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb02020
Two-component system
psmb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H3302_04420
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3302_04420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psmb02022
]
H3302_04420
02035 Bacterial motility proteins [BR:
psmb02035
]
H3302_04420
Two-component system [BR:
psmb02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
H3302_04420
Bacterial motility proteins [BR:
psmb02035
]
Flagellar system
Flagellar assembly proteins
Others
H3302_04420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
AAA
FleQ
DUF2089
AAA_16
MerR
HTH_20
MFD_D3
Sigma70_r4_2
AAA_3
HTH_24
HTH_23
HTH_5
MCM
AAA_19
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QMW15351
LinkDB
All DBs
Position
1:958569..959975
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AA seq
468 aa
AA seq
DB search
MNTNSILVVEDDAGLREALIDTLEMSGIDCIAADSAEQAMVLLKQGTYSLVVSDVQMGAM
SGLDLLRSIKLNYPELPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYLP
EKEKETDGPIVADPSSIKLLELASKVARSDASVMVLGPSGSGKEVLARFIHDKSSRADAP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAK
LLRVLQEREVERLGGRKTIELDVRVLATSNRDLKEAVSENLFREDLYYRLNVFPLMWRPL
CERPGDIIVLAEHLIERHCIRSKEPIALLTEQAKQKLLSHAWPGNVRELDNVIQRALILC
DGNSIHEDDIFIEELLAVKAQTVNSAPVQNAPVYKEQVVNPMHDEIPSVNEQGNYKDELK
DKEHRIILETLARCQGKRKEVAETLGISPRTLRYKLAQMRDLGIALPA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaactctattttagtcgttgaagacgacgcaggcttacgcgaagccttaatt
gatacattggaaatgtcaggtattgattgcatcgctgccgacagtgccgagcaagcaatg
gtattgctaaagcaaggaacgtattcattggtggtaagcgatgtacaaatgggcgcgatg
agcggccttgatttattgcgtagcattaaacttaattaccctgagctaccagtattaatg
atgacagcatacgccaccattgatgatgcggttgaggcaatgcgtttaggggctattgat
tatatggctaaaccatttgcacctgaagttttattgaatatggtgagtcgttatttaccc
gagaaagaaaaagaaaccgatgggccgattgtcgcggatccatccagtattaaattactt
gagctggccagtaaagtggcacgttcagatgccagtgtcatggtgctcggacccagtggt
tcgggtaaagaagtgctggcgcgctttattcacgataaatcaagtcgcgcagatgccccc
tttgtagcgattaactgtgctgctattcctgagaacatgttagaagcgaccttgtttggt
tatgaaaaaggcgcgtttactggggcgattcaagcgtgtcctggcaaatttgaacaagca
caaggtggcactatcttgcttgacgaaatcaccgaaatggatttaggtctgcaagctaag
ttactgcgtgttttgcaagagcgtgaagttgagcgtttgggtggtcgtaaaaccattgag
ctcgatgttagagtgctcgcaaccagtaaccgtgatttaaaagaagctgttagcgaaaat
ttattcagagaagatttgtattatcgtttaaatgtttttcctttaatgtggcgtccgctg
tgtgagcgcccaggtgatattattgtccttgcagagcatttaattgagcgtcattgcatc
agaagtaaagagcctatcgcattattaactgagcaagctaagcaaaaactgctatcgcat
gcttggccgggtaatgtccgtgaacttgataatgtgattcagcgtgcactgatactatgt
gatggtaatagcattcatgaagacgatatatttattgaagagctcttagcggttaaagca
cagactgtaaatagtgcaccggtgcaaaatgccccggtttataaagagcaagtggttaac
cccatgcatgacgaaattccatctgttaacgagcagggaaattataaagatgagcttaaa
gacaaagagcatcgcattattttagaaaccctagctaggtgccaaggaaagcgcaaagag
gttgctgaaacattagggattagtccacgaacacttagatataaactagctcaaatgcgc
gatttaggtattgcattacccgcttaa
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