Pseudoalteromonas sp. MT33b: H3302_04515
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Entry
H3302_04515 CDS
T10969
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb02020
Two-component system
psmb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H3302_04515
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3302_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psmb03021
]
H3302_04515
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psmb02035
]
H3302_04515
Transcription machinery [BR:
psmb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3302_04515
Bacterial motility proteins [BR:
psmb02035
]
Flagellar system
Flagellar assembly proteins
Stator
H3302_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
UPF0122
UTP15_C
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
QMW16072
LinkDB
All DBs
Position
1:977996..978706
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AA seq
236 aa
AA seq
DB search
MGYQSAQNLNAIVEKHASLVKKVACHLIARLPASVQLDDLIQSGMIGLIEASKNFDASKG
ASFETFAGIRIRGAMLDEIRRGDWAPRSVHRNARLVAETISDLESILNREPKDTEVAEKL
DITLDEYHHILHDVNSSKVLGIEDLGVDEDVITPMGHDLALDKPFNNVKNERFNQSLLTA
IQSLPERDALVLSLYYNDEMNLKEIGHILDVSESRVSQIHGQAMIKLKAKINDWIN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggatatcaatcagcacagaatttaaatgcgattgttgaaaaacatgcctctttagtc
aaaaaagtggcgtgtcatctaattgctcgtttacctgccagtgtgcaactcgatgatttg
attcagtcaggtatgattggccttatagaagcgtcgaaaaattttgatgcgagtaaaggg
gccagttttgaaacatttgcgggtattcgaattcgaggggctatgctcgatgaaatccgt
cgaggtgattgggctccccgttcagttcaccgtaatgcacgccttgtcgctgaaacgatt
tcggatttagagagtattttaaaccgcgagccaaaagacacagaagttgctgaaaaactt
gatattacactggatgagtaccatcatattctacatgatgtaaattccagtaaggtactg
ggtatagaggatttaggcgttgatgaagacgtcatcacacctatggggcatgatttagca
ctagacaaaccgtttaataatgttaaaaatgaacggtttaaccagtctctattgacggct
atccaatcgttaccagaaagagatgcactcgttttgtctttgtattacaacgatgaaatg
aacttaaaagaaatagggcacatactcgatgttagcgaatcgcgtgtgagtcaaatacat
ggtcaggcgatgattaagctcaaagcaaaaatcaatgactggattaattag
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