Pseudoalteromonas sp. MT33b: H3302_04980
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Entry
H3302_04980 CDS
T10969
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3302_04980 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psmb03019
]
H3302_04980 (pnp)
03016 Transfer RNA biogenesis [BR:
psmb03016
]
H3302_04980 (pnp)
Enzymes [BR:
psmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H3302_04980 (pnp)
Messenger RNA biogenesis [BR:
psmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H3302_04980 (pnp)
Transfer RNA biogenesis [BR:
psmb03016
]
Prokaryotic type
tRNA degradation factors
H3302_04980 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
OB_PDCD11
OB_RRP5_4th
S1_TP0910
KH_2
S1_2
KH-I_KHDC4-BBP
aRib
KH_NusA_2nd
KH_SLS1_2
PQQ
Motif
Other DBs
NCBI-ProteinID:
QMW15457
LinkDB
All DBs
Position
1:1074266..1076398
Genome browser
AA seq
710 aa
AA seq
DB search
MQAIIKEFQLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKRDAQPGQDFFPLTV
NYQERMYAAGRIPGGFLKREGRPNDGETLIARLIDRPIRPLFPNGFVNEVQVIATVVSVN
PEIQPDMVAMIGTSAALAISGIPFNGPIGASRVGFINGEYVLNPTLKELEESQLDLVVAG
TDNAVLMVESEANVLSEDVMLGAVVYGHEQSQAIINAINEFKAEAGKPTWDWTAPEKNVA
LEEKVAELAADKVGEAYRITDKVARKEALGAAKDAVIEALSAELAEDETLDTQEVSKVFG
SLEKKIVRGRITAGEKRIDGREPDMIRALDVMTGVLPRTHGSAIFTRGETQALVTATLGT
ERDSQLIDDLTGTHKNHFMLNYNFPPFCVGETGFVGSPKRREIGHGNLAKRGIQAVMPTL
TEFPYSIRVVSEITESNGSSSMASVCGTSLALMNAGVPIKASVAGIAMGLVKEEENFVVL
SDILGDEDHLGDMDFKVAGTSDGITALQMDIKIEGITQEIMQIALKQAKAARLHILGVMD
EAISAPSEELSQFAPRIYTMQIPAKKIAEVIGKGGATIRQLTEETGTTIEIEDDGTIKIA
ATDGISANNAIKRIEQLTAELEVGTIYTGKVVRIVDFGAFVNILPGKDGLVHISQISTER
VNNVTDHLSEGQEVQVKVLEVDRQGRVRLSIKEAMAPAAEETAEAPKDAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaattattaaagaatttcaactaggtcaacacactgtgacactagaaacaggt
gctatcgctcgtcaagctgacggcgctgtacttgcaagcattggcgacacttcagtactt
gttactgttgttggtaagcgtgatgcacaaccaggtcaagactttttcccactaacagtt
aactaccaagagcgcatgtacgctgcgggtcgtatccctggtggtttccttaagcgtgaa
ggtcgtcctaacgatggcgaaacacttattgcacgtttaattgaccgtccaattcgtcca
cttttcccgaatggcttcgtaaatgaagtacaagttatcgcgacagttgtttctgtaaac
cctgaaatccaacctgatatggttgcaatgattggtacatcagcagcgcttgcaatttct
ggtattccatttaatggtcctatcggtgcatcacgtgttggtttcatcaacggcgaatac
gttctaaacccaacgttaaaagagcttgaagaaagccaacttgatttagtggttgcgggc
acagacaacgcggtattaatggttgagtctgaagcgaacgtgctgtctgaagatgttatg
ttaggcgctgttgtatatggtcatgagcaatctcaggctatcatcaacgcaatcaatgag
ttcaaagcagaagcgggcaagcctacatgggattggactgcaccagaaaagaacgttgca
cttgaagagaaagtagctgaacttgctgctgataaagtgggtgaagcataccgcatcact
gacaaagtagcgcgtaaagaagcgttaggcgcagctaaagacgctgttattgaagcgctt
tctgctgagcttgctgaagacgaaacacttgatactcaagaagtaagtaaagtatttggt
tctttagagaagaaaattgttcgtggccgtatcactgccggtgaaaaacgtatcgatggt
cgtgaaccagatatgatccgtgcactagacgtaatgacgggtgtattaccgcgtactcac
ggttctgctatcttcacacgtggtgaaacacaagcacttgttactgcaacgcttggtaca
gaacgtgattcacagttaattgatgatttaacgggcacgcacaaaaaccacttcatgctt
aactacaatttccctccgttctgcgtaggtgaaacaggttttgttggttcacctaagcgt
cgtgaaatcggccacggtaacctagctaagcgtggtatccaagctgtaatgccaacacta
actgagttcccttactcaatccgtgttgtatctgagatcaccgagtctaacggttcatct
tcaatggcgtctgtatgtggtacttctcttgcgttaatgaacgcgggtgtgcctattaaa
gcctctgttgcaggtattgcgatgggtcttgttaaagaagaagaaaactttgttgttctt
tctgacatcttaggtgatgaagatcacttaggtgacatggactttaaagttgcgggtact
tcagacggtatcactgcacttcaaatggatatcaaaatcgaaggtatcacacaagaaatc
atgcaaatcgcgcttaaacaagcaaaagctgcacgtttacacatcttaggtgtaatggac
gaagcgatttctgctccttctgaagagttatctcagttcgctccacgtatctacacgatg
caaattccggcgaagaaaattgctgaagtaattggtaaaggtggcgcaacgattcgtcaa
cttactgaagaaacaggcacaacgattgaaatcgaagacgatggtacaatcaaaattgca
gcaactgacggcattagcgcaaataatgcaatcaagcgcattgagcaattaacagcagaa
cttgaagtaggcacaatctacacaggtaaagttgttcgtatcgttgattttggtgcattc
gttaatatccttccgggtaaagatggcctagtgcatatttctcaaatcagcactgagcgc
gtaaacaacgttactgatcacttaagcgaaggccaagaagtacaagtaaaagtacttgag
gttgaccgccaaggtcgcgtacgtttaagtatcaaagaagcgatggcaccggctgctgaa
gaaacagcagaagcgcctaaagacgctgaataa
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