Pseudoalteromonas sp. MT33b: H3302_17175
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Entry
H3302_17175 CDS
T10969
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
psmb Pseudoalteromonas sp. MT33b
Pathway
psmb02020
Two-component system
psmb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H3302_17175
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
H3302_17175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psmb02035
]
H3302_17175
Bacterial motility proteins [BR:
psmb02035
]
Flagellar system
Chemotaxis proteins
MCPs
H3302_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF6468
Motif
Other DBs
NCBI-ProteinID:
QMW16717
LinkDB
All DBs
Position
2:240395..242020
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AA seq
541 aa
AA seq
DB search
MSAGISFKNLSITKKIHAITCIAVIAFVIIVLTNYIAMSDNRGSLDELEKSSYQVVKLTS
ANVALLEKLDELYTQAVTFGESDLVDSAAQTYKVINENLQNIIAINNSYVNAETKEKLQQ
YAKTSSAIASSMIDGTADFSKIQQQAQQKTKLYEAVLTGFKGAQARADDRFFELVQATKA
RSDNALHLMLVVSIISLVLLVITSIWIARGIGSSASAAADNLRLLADGKGSLSTQLAVHA
KDEIGHVSINFNAFIKLLKAAVLEVIAVCEPLMENSTRLVQGMERAEKATTKQTTDAEIV
KQSMEEMRQSVADISHSAASASEAAQTAEREVEQSRTQIQRSVIESRTLSDEINQAASTI
NQLASDTKNVTQILNVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRELASRTS
QSTNEIRELLSTLTTAASESVNAMNSARDMAMNNAEAAENTGLSIEKISEQILEINGMNS
QIAAATEEQTSVASMVVENVSNMHMSFEETMDSLSAVRDVAKNLHYLSDSLLDATAKFKV
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaggtatttcatttaaaaatctaagtattacaaaaaaaattcatgccataaca
tgcattgcagtcattgcatttgtcattattgtgctaaccaactatatcgcgatgagcgat
aatagaggctcacttgatgagctagaaaagtcgtcttatcaagtcgttaaactcacctcg
gcaaatgtggccttactcgaaaagctcgatgagctatacacacaagcggtcacctttggc
gagtcagacttagtcgatagcgcagcacaaacgtacaaagtaattaacgaaaacctgcaa
aatattattgctatcaataacagctatgtgaacgcagaaacaaaagaaaaactacagcaa
tacgcaaaaacctcttctgctattgccagctccatgatcgacggtacagccgactttagt
aaaattcagcagcaggcacagcaaaaaacaaagctatatgaagccgtactcaccggcttt
aaaggggctcaggcgcgcgctgatgaccgcttttttgaattagtacaagccactaaagcg
cgttctgacaacgcattgcatttaatgctcgttgtgtcgattatatcgttagttttattg
gtgattacctcaatttggattgcccgtggtattggctcgtctgcaagtgcggctgccgac
aacttacgcttacttgcagatggcaaaggctctttaagcacgcagctggctgtgcatgct
aaagacgaaattggtcatgtatccattaactttaatgcctttataaagctattaaaggcc
gcagtacttgaagtaattgcagtgtgcgagccgctaatggaaaactcaacccgattagta
caaggtatggaacgcgccgaaaaagccacaaccaaacaaacgaccgatgcagaaatagtg
aagcaatcaatggaagaaatgcgccaaagcgtggccgacatctctcattctgctgcaagt
gcatctgaagcagcgcaaacagcagagcgcgaagtagagcaaagccgcacgcaaattcag
cgctcagtgatagagtcacgcaccttaagcgacgaaataaaccaagccgcttcaacaatc
aaccaattggcaagcgacactaaaaacgtaacgcaaattttgaacgtgatcacttcaatt
gcagagcaaaccaacttattagcgctgaatgctgcaattgaagccgcgcgcgccggtgag
caaggtcgaggctttgccgtggtagccgacgaagtaagagaactggcttcacgtacatcg
caatcgacaaatgaaatcagagagctgctttcaacacttaccaccgcagccagtgaatcg
gtaaatgcaatgaactcagcgcgcgacatggcaatgaacaacgccgaagctgcagagaat
acaggcctatcgattgagaaaatctctgagcaaattttagaaattaacggcatgaactcg
caaattgccgccgcaaccgaagagcaaacctctgttgccagcatggttgtagaaaatgtg
tctaacatgcacatgtcgttcgaagagaccatggactcgctttcggcagtacgcgatgtt
gctaaaaacttacattacctgtctgactcactgttagacgccacagcaaaatttaaagtt
gaataa
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