Pseudoalteromonas sp. MT33b: H3302_19075
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Entry
H3302_19075 CDS
T10969
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psmb Pseudoalteromonas sp. MT33b
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmb03400
]
H3302_19075 (phrB)
Enzymes [BR:
psmb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H3302_19075 (phrB)
DNA repair and recombination proteins [BR:
psmb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H3302_19075 (phrB)
Prokaryotic type
H3302_19075 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Methyltransf_34
Motif
Other DBs
NCBI-ProteinID:
QMW16379
LinkDB
All DBs
Position
2:712431..713822
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AA seq
463 aa
AA seq
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MKTLFWFRRDLRLFNNDALYRAIDNGCQDAVFFITEKQWQQHDVAPIQIDLLKRRLAFLG
QLLADKGITLHLIDAHDYSGCVDKLSAFCQQHSIENVYANNEYELNEVERDNAFLAKADA
LNVHFYSYDGDVIAPPGSIKNQSGEMFKVFTPFKNAWLKQFQDTHFYFAEPPNMPPAVQW
QENELLTSDGSSEKWPVDDETLSHVCARFIDEKLGTYQEQRDIPSIKGTSGLSPYLALGI
ISVHQLLALIQQRHPDVLKNAKSNLFCWVNELIWREFYRHLIAIYPSLSKYANFNDKYDA
VAWRDDEHDFNAWCEGKTGYPLVDAAMRQLLQTGWMHNRLRMVVASFLTKHLLIDWRKGE
RFFMKHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPITQSERFDPDGEFIRKYLPELE
KIPAKHIHFPHDYLAKQGSKSSYWSPIVDHKAARERALNAFKV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattattttggtttaggcgcgatttgcgcctttttaataacgacgctttatat
cgcgctatcgacaatggatgccaagatgcggtgttttttataaccgaaaaacaatggcaa
caacatgatgtagcacctattcagattgatttattaaagcgccgtttagcatttttaggg
caacttttagcagacaaaggcattacattacaccttattgatgcacacgattattcgggg
tgtgttgataagctctcagcgttttgccaacagcattctattgaaaatgtttatgcaaat
aatgaatacgaactcaatgaagttgaacgagataatgcatttttagctaaagctgatgcg
ctaaatgtacatttttacagctatgatggtgatgttattgcccccccaggcagtattaaa
aaccaaagtggcgagatgtttaaagtgttcacacctttcaaaaatgcgtggttaaagcag
tttcaagatacgcatttttattttgccgagccgcctaatatgccacctgcagttcagtgg
caagaaaatgaattattaacctctgacggcagctccgaaaaatggccggttgatgatgaa
acgctaagccatgtatgtgcacgctttatcgacgaaaagcttggtacgtatcaggaacaa
cgtgatatcccaagtattaaaggcacctctggtttaagcccttatttagcgctgggtatt
attagtgttcatcagttgctggcgctcattcagcagcgtcatcccgatgtattgaaaaat
gctaaaagtaatctgttttgctgggtaaacgagttgatttggcgcgagttctatcgtcac
ctgattgcgatttatccaagtttgagtaaatacgccaacttcaacgataaatacgatgcg
gtagcatggcgcgacgacgaacatgattttaatgcgtggtgtgaaggtaaaaccggctat
ccgcttgtggatgcagcaatgcgacaattattgcaaaccggctggatgcataaccggttg
cgtatggtggttgctagtttcttaactaagcacctccttattgattggcgcaaaggcgaa
cgcttttttatgaaacacttgattgatggcgatctggcgtcaaacaatggtgggtggcaa
tgggctgctagcacagggtgtgatgcacaaccttattttcgtatttttaatccaattacc
caaagcgagcgctttgatccagatggtgagtttatccgtaaatatctaccagagttggaa
aaaatacctgcgaaacacattcacttcccacatgactacttagctaaacagggaagtaaa
agcagttattggtctccaatagttgatcataaagcggcgcgagagcgtgcgttgaacgcg
tttaaggtgtga
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