Pseudomonas sp. MM213: K5R88_00085
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Entry
K5R88_00085 CDS
T11312
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00071
Fatty acid degradation
psmd00280
Valine, leucine and isoleucine degradation
psmd00310
Lysine degradation
psmd00362
Benzoate degradation
psmd00380
Tryptophan metabolism
psmd00410
beta-Alanine metabolism
psmd00640
Propanoate metabolism
psmd00650
Butanoate metabolism
psmd00907
Pinene, camphor and geraniol degradation
psmd00930
Caprolactam degradation
psmd01100
Metabolic pathways
psmd01110
Biosynthesis of secondary metabolites
psmd01120
Microbial metabolism in diverse environments
psmd01200
Carbon metabolism
psmd01212
Fatty acid metabolism
Module
psmd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K5R88_00085 (fadB)
00650 Butanoate metabolism
K5R88_00085 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K5R88_00085 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K5R88_00085 (fadB)
00310 Lysine degradation
K5R88_00085 (fadB)
00380 Tryptophan metabolism
K5R88_00085 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K5R88_00085 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K5R88_00085 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K5R88_00085 (fadB)
00930 Caprolactam degradation
K5R88_00085 (fadB)
Enzymes [BR:
psmd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K5R88_00085 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K5R88_00085 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K5R88_00085 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K5R88_00085 (fadB)
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Other DBs
NCBI-ProteinID:
UCP10093
LinkDB
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Position
20453..22600
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSVTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgagaacttcaagctg
cctgatgcagagcttgtcgctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtcccgactgtcgccgcgatcaacggcatcgccctgggtggcggtctggaa
atgtgcctggcggcggactaccgcgtcatgtccgtcacggccaagatcggtctgccggaa
gtcaagctgggcatctacccgggtttcggcggcactgtacgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgccggtaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgcagtcgatgcagtggttgcacctgagaaactgcaggaagccgctctggaa
ctgatcaagcgcgccatctccggcgagttcgactacaaggccaagcgtcaaccgaagctt
gagaaactcaagctgaacgccatcgaacaaatgatggctttcgaaaccgccaaaggtttc
gtggcaggccaggctggcccgaactacccggcaccggtcgaagcgatcaagaccatccag
aaagctgcgaacttcggtcgcgacaaagcgctggaagtcgaagccgccggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgaccaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaagacgtgaagcaggctgccgtattg
ggcgctggcatcatgggtggcggtatcgcttatcagtcggcctccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcaaggcctggctgaagccgccaagctg
ctggtcggtcgcgttgataaaggtcgcatgaccgcggcgaaaatggccgaagtgctcaac
ggcattcgtccgaccctgtcctacggcgacttcggtcacgttgacctggtggttgaagcg
gtcgtcgagaaccctaaggtcaagcaggctgtgctggctgaagtggaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcaccttgctggccaaagcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgattcgtggcgagaagtccagcgagctggccgttgccactaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aatcgcgtcctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgttatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgttcggctgttgacgtgctctacgaagccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaagttgccgacccgtcggtgctggaagtgctcaagccaatcgtctttgaacagcgc
gaagtgactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcaaaactgcgtgaaatggccaaaaccggccaacggttcttcggttaa
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