Pseudomonas sp. MM213: K5R88_04495
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Entry
K5R88_04495 CDS
T11312
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd03030
DNA replication
psmd03430
Mismatch repair
psmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5R88_04495 (dnaQ)
03430 Mismatch repair
K5R88_04495 (dnaQ)
03440 Homologous recombination
K5R88_04495 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmd03032
]
K5R88_04495 (dnaQ)
03400 DNA repair and recombination proteins [BR:
psmd03400
]
K5R88_04495 (dnaQ)
Enzymes [BR:
psmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5R88_04495 (dnaQ)
DNA replication proteins [BR:
psmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5R88_04495 (dnaQ)
DNA repair and recombination proteins [BR:
psmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5R88_04495 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UCP10902
LinkDB
All DBs
Position
968134..968892
Genome browser
AA seq
252 aa
AA seq
DB search
MATRSVVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGVHG
ITNEFLVGKPRFTEVADEFFEFIKGAQLIIHNAAFDVGFINNEFALMGQHDRADITQHCS
ILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLS
LAGNASDGNGSGEGADNSATEIRRLPADRQPTRIIRASEDDLAQHMARLEVIAKSAGAPS
LWQQLLEAEAQA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagatccgttgtactcgataccgaaaccaccggcatgccggtgaccgacggc
caccggattatcgaaatcggttgtgtcgagttgatcggtcggcgcctgaccggccggcat
tttcacgtttacctgcaaccagaccgcgaaagtgacgaaggcgccatcggcgttcacggc
atcaccaacgaattcctggtgggcaagccgcgtttcactgaagtggctgatgagtttttc
gaattcatcaagggcgcgcagctgatcatccataacgcggcgttcgacgttggcttcatc
aacaacgaattcgccctgatgggccagcacgatcgtgcggacatcacgcaacactgctcg
atcctcgacaccctgatgatggcccgggaacgtcacccggggcagcgcaacagcctcgac
gccttgtgcaaacgttatggcgtcgacaactccggtcgtgaactccacggcgccttgctc
gactccgagattctcgccgacgtttacctgaccatgaccggcggccagaccagcctgtcg
ctggccggcaatgcgtccgacggcaacgggtctggtgagggggcggacaactcagccacg
gagatccgccgtttgccggccgatcgccagccaacccgtatcatccgcgccagtgaagat
gatttggcgcaacacatggctcgtctggaagtcatcgcaaaatccgctggtgcgccatcg
ctgtggcagcaactgcttgaggctgaagctcaggcgtaa
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