Pseudomonas sp. MM213: K5R88_07140
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Entry
K5R88_07140 CDS
T11312
Name
(GenBank) LysR family transcriptional regulator
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
psmd Pseudomonas sp. MM213
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psmd03000
]
K5R88_07140
Transcription factors [BR:
psmd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K5R88_07140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
FilR1_N
SBP_bac_11
Toxin-deaminase
Motif
Other DBs
NCBI-ProteinID:
UCP11403
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Position
1598543..1599460
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AA seq
305 aa
AA seq
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MKLIQLRAFCSVVDMGSFRSAARTLEAAQSTLTESIQSLERELGATLLVRSNQGISLTLA
GKVFLTRARSIILDCDRAVQDVRQCNGAPEGQIALGVTTEPLAACLMPVFNSFTRRFPNV
QLHVAGGQTKKLIEMIRAGRLDFVMCPLSADVCDIDLQIERLYRSKASVIARKGHPLAEA
RSVRDLADCQWISVRPAGIAGSAEKQLIELFKAQGLPPPKIAITTESLLEILHIISETDY
LTIEPGMLAGMKLFSSSLTSISIREPLESCEVCLISRRVSPFTQVTQELTSMLISYSRLR
HRAKG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatccagcttcgggcgttctgctcagtggtcgacatgggcagttttcgttcg
gcggcgcgaacgctggaagcggctcaaagcaccttgaccgagtcgattcaaagtctggaa
agagaactgggggccaccttgttggtgcgctccaatcaaggcatcagcctgaccctggcc
ggcaaggttttcctgaccagggcacgctcgatcattctggattgtgatcgcgcagtacag
gacgtccgacaatgcaacggtgcgcccgaaggtcagatcgcattgggtgtcacgacggaa
cccttggctgcgtgcctgatgccggtcttcaacagttttacccgccgatttccaaacgtg
cagttgcacgtcgccggtggccagacgaagaagttgatcgaaatgattcgcgcgggccgg
ctcgactttgtgatgtgtccactgagtgccgacgtttgcgatatcgacttgcagattgag
cggctttaccgctcgaaagccagcgtcattgcgcgcaaggggcatcccctggcggaggct
cgctcagtgcgcgacctcgccgactgccagtggatcagcgtccgcccggcggggattgcc
ggtagcgcggagaagcaactgatcgagctgttcaaagcccaaggcttgccgcccccgaag
atcgcgatcacgaccgagtcgctgctggaaatcctgcacatcatctccgagacggactac
ctgaccattgagcccggcatgcttgccggcatgaagctgttttcctcgtcgctgaccagc
atttcgatccgcgagccgctggagtcgtgcgaggtgtgcctgatcagccgtcgagtgtca
cccttcacccaagtgacacaagaactgaccagcatgctgatttcgtactcacgcttgcgt
caccgagccaaggggtga
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