Pseudomonas sp. MM213: K5R88_12135
Help
Entry
K5R88_12135 CDS
T11312
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00550
Peptidoglycan biosynthesis
psmd01100
Metabolic pathways
psmd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5R88_12135 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K5R88_12135 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
K5R88_12135 (mrdA)
Enzymes [BR:
psmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K5R88_12135 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K5R88_12135 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UCP12324
LinkDB
All DBs
Position
complement(2700178..2702070)
Genome browser
AA seq
630 aa
AA seq
DB search
MPQPIPIKDHEKETRLVNKRLMACALFVVAITCALVVRMYVLQVVEFDYHSTISENNRVH
VLPITPTRGLIYDRNGVVLADNRPSFNLTITRERAADVKEELDEVVNLLHLPAEDRTLFD
KAMKQARHPFVPVTLFYELSEEQIAVLAVNEFRLPGIDVEPQFVRHYPMGAHFAHSIGYV
GRINEKESKALDTVEYRGTQSIGKTGIEKFYESELHGHVGYEEVETNAQGRVLRVLKHTD
PVPGKNIVLSLDVKLQEAAEEALGDRRGSVVALDPSTGEVLAMVSKPSFDPNLFVTGISF
KEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESAGLMPSQAWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVTPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAQGAQYRIAGKSG
TAQVVAIKQGERYNRAKTLERNRDNALFVGFAPAEHPKIVISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYATPSKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaccgataccgatcaaggaccacgaaaaagagacgcgcctggtcaacaaaaga
ctgatggcttgcgccttgttcgtcgtcgctatcacctgcgcactggtggtgcgcatgtac
gtactgcaagtcgtcgagtttgactatcactcgaccatctccgaaaacaatcgcgtccac
gtattgccgatcacccccacgcgcggattgatctacgaccgcaacggcgtggtcctcgcc
gacaaccgccccagcttcaacctgaccatcacccgcgaacgcgccgctgacgtcaaagaa
gagctggacgaggtggtcaatctcctgcacctgcccgctgaagaccggacgctctttgac
aaggcgatgaagcaggcgcgccacccctttgtgcccgtcacgctgttttacgaactcagt
gaagagcaaatcgccgtactcgccgtcaacgaattccgtctgcccggaatcgacgttgag
ccgcagttcgtccgccattacccgatgggcgcgcacttcgcccattccatcggctacgtc
ggccgaatcaacgagaaagaatccaaggccctggacactgtcgagtaccgaggcacccaa
tccatcggcaagaccgggattgaaaagttttatgaatcagaattgcacggccacgtcggt
tacgaagaagtagaaaccaacgcccagggtcgcgtgctgcgagtgctcaaacacaccgat
ccggtgcctggtaaaaacatcgtcctgagcctcgacgtcaaacttcaggaagccgccgaa
gaagccttgggtgatcgccgcggttcagtggtcgcgctcgatccatcgaccggtgaagtg
ctggccatggtcagcaagccaagctttgacccgaacctgttcgtgaccgggatcagcttc
aaggagtacgcggcactgcatgactccatcgaccggccgctgtttaaccgcgtgctgcgc
ggtctttatgcgcccggttcgaccatcaagcctgaagtggcgattgccggcctggatgcg
ggtgtcgtgaccccgcagacccgcgtcttcgacccgggttattaccagctcccggacttc
gatcacaaataccgtaactggaaccacagcggcgacggttgggtggacatggacgcggcg
atcatgcgctccaacgacacctacttctacgacctggcgcacaagctgggcatcgatcgc
ctgcacgactacatggcgatgttcgggcttggcgagaaggtctcgctggatatgttcgaa
gagtctgccggtttgatgccgtctcaggcctggaagcgtgccacgcgacgtcaggcgtgg
ttccccggcgaaacggtaatcctcggcatcggccagggttacatgcaggtcacgccgctg
cagctggctcaagccaccgcgctgatcgccaacaaaggtgtctggaaccgcccgcacctg
gccaagaccgtggacggtgtgacgccagtggatgagcatccgatgccaaacatcctgttg
aaagacccgcgtgactgggagcaggtcaaccacggcatgcaaatggtcatgcacgacgct
cgcgggatcgcccgagcggcggctcaaggtgcgcaatatcgcatcgccgggaaaagtggt
accgcgcaagtggtcgcgatcaaacagggtgagcgctacaaccgggcgaaaaccctggag
cggaaccgcgacaacgccttgtttgtcggcttcgcaccagccgagcacccgaagattgtc
atctcggtgatgatcgaaaacggcgaggccggcggtcgcgtcgccgggcctgtggtgcga
cagatcatggacgcctggttactcgatcaggacggccacctgaaaccgcaatacgccacg
ccgagtaaagcgcctggcgatcctcacgtttaa
DBGET
integrated database retrieval system