Pseudomonas sp. MM213: K5R88_15295
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Entry
K5R88_15295 CDS
T11312
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K5R88_15295 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmd03400
]
K5R88_15295 (recO)
DNA repair and recombination proteins [BR:
psmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K5R88_15295 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K5R88_15295 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
UCP07219
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All DBs
Position
complement(3405118..3405801)
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AA seq
227 aa
AA seq
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MSQPIGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSARGKAGTLARPFVPLEVEFRG
RGELKNVGRMESAGTSTWLIGEALFSGLYLNELLIRLLPSEDPHPAVFDHYAATLLALAE
GRPLEPLLRSFEWRLLDDLGYGFALNTDIHGEPVAPDGLYRLQVDAGLERVYLLQPGLFN
GTELLAMADADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccatcggccaacccgcctacgtcctccactcccgcgcctaccgcgaaaac
agcgcactggtggatttcctcacgccgcaaggtcggctgcgggcggtgttgcgcagtgcg
cggggcaaggccgggacgttggcgcggccgttcgtgccgctggaagtcgagttccggggg
cggggcgaactgaagaatgtcgggcgcatggaaagtgccggtacgtcgacatggctcatc
ggtgaggcgctgttcagcgggctttacctcaatgagctgttgattcgcctgttgccatca
gaagatccccatcccgctgtcttcgatcactacgccgcgactttgcttgcgctggccgaa
ggccgcccgctggagccgctgctgcgttccttcgaatggcgcttgctcgacgatctcggt
tacggcttcgcgctgaacaccgacatccacggcgaacccgtcgcgccggacggcctgtat
cgtctacaggtggatgccggcctggaacgggtctacctgctgcaacccggtctgttcaac
ggcaccgagttgctggccatggccgacgccgactggtcggcccccggcgcgttgtccgcc
gccaagcgtttgatgcgccaggcattggccgttcacctgggcggtcgtcccctggtttcc
cgagagttgtttcgaaagccgtag
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