Pseudomonas sp. MM213: K5R88_15615
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Entry
K5R88_15615 CDS
T11312
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00470
D-Amino acid metabolism
psmd00550
Peptidoglycan biosynthesis
psmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K5R88_15615 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5R88_15615 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
K5R88_15615 (murD)
Enzymes [BR:
psmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
K5R88_15615 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
Precursor biosynthesis
Amino acid ligase
K5R88_15615 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UCP07280
LinkDB
All DBs
Position
complement(3476736..3478082)
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AA seq
448 aa
AA seq
DB search
MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELATLKRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLRDDIELYVMELSSFQLETTDQLNAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDALSRPLMGEGQPCWTFGLSKPD
FKAFGIREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRDLDGVSYYNDSKATNVGAALAAIEGLGADIDGKVVLIAGGDGKGAE
FNDLRDPVAANCRAVILMGRDSDKIGEAIGDAVPLIRAASLVEAVQQCRAAAQPGDVVLL
SPACASFDMFKNYEDRGHQFVQAVEDLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgccgtggccgatacgcgggaa
aatccaccggaactggccacgctcaagcgtgactatccgcacgtggaagtgcgttgtggc
gagctggacgtcgaattcctgtgccgcgccgatgagctctacgtgagccccggcctggcg
ctggcgaccccggccctgcaggctgccgccgctcgtggcgtgaagctgtccggcgacatc
gagctgttcgcgcgtaacgcgaaggcgccgattgtcgccatcagtggctccaatgcgaaa
agcaccgtgaccacgctggtgggcgagatggcagctgcggccggcaagcgcgtcgctgtc
ggcggcaacctcggcacgccggcgctggacctgcttcgcgatgacatcgagttgtacgtg
atggaactgtcgagcttccagctcgaaaccaccgaccagctcaacgccgaagtggcgacc
gtgctcaacgtcagcgaagaccacatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccggatcttccgtggtgccagacagttcgtggtcaaccgtcaggacgccctg
agccgtccgttgatgggcgaaggtcagccctgctggaccttcggtttgagcaaacccgat
ttcaaggcgtttggtatccgcgaagaagacggcgagaaatacctcgccttcgaattccag
aacctgatgccggtgcgcgagttgaaaattcgcggcgcccacaatcagtcgaatgccctg
gcggcgctggccctgggccacgcggtcggcctgccgttcgacgccatgctgtcgagcctg
cgcacgttcgccggtctcgaacatcgctgccagtgggttcgtgacctggacggcgtgagc
tactacaacgattccaaagccaccaacgtcggcgcagcgctggctgccatcgaaggcctg
ggtgcggacatcgacggcaaggtcgtgctgatcgccggtggcgacggcaagggtgccgag
ttcaatgatctgcgtgatccggtggcggccaactgccgcgccgtgatcctgatgggccgc
gactccgacaagatcggtgaggccattggcgacgccgtgccgctgatccgcgctgcttcg
ctggttgaagcggtgcagcaatgccgcgccgctgcgcaaccgggcgacgtggtgttgttg
tcgccggcctgcgccagcttcgacatgttcaagaattacgaagaccgtggtcaccagttc
gtccaggcagtggaggatctggcatga
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