Pseudomonas sp. MM213: K5R88_16305
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Entry
K5R88_16305 CDS
T11312
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5R88_16305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psmd03019
]
K5R88_16305
Enzymes [BR:
psmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K5R88_16305
Messenger RNA biogenesis [BR:
psmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K5R88_16305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
UCP07400
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All DBs
Position
3618583..3619983
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AA seq
466 aa
AA seq
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MLKKLFQSFRSPKRHTQHIRSTPEVLNSGQHSLQKAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMMLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPKQRYQEDPVRMLRAVRFAAKLNFGIEKHSALPIRDLAPMLREIPSA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERRDMIRDLSGKEDGTGAPRKRRRSGGAKRKRAAGAPSTTGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttctcccaagcgtcatacgcaacacatccgc
agcacgcctgaagtgcttaacagcggccaacactcgctgcaaaaggcacaattcagccgt
tacgcggtgaatatcgtcgaacgcctgcagaacgccggttaccaggcttacctggtcggc
ggttgtgtgcgtgacatgatgctcggcatcacaccgaaagactttgacgtcgccaccagt
gccacccctgaacaggtgcgcgccgaattccgtaatgcgcggatcatcggccgccgcttc
aaactggtgcacatccactttggccgcgaaatcattgaagtcgcgaccttccgcgccaat
cacccgcaaaacgatgaagaggaagacagcaaccagtcttcccgcaacgagagcgggcgc
attctgcgcgataacgtctacggcacgctggaagaagacgcgcaacgccgcgacttcacc
atcaacgccctgtattacgatccggtcagcgagcgcatcctcgactacgccaacggcgta
cacgacatccgcaaccacctgatccgcctgatcggcgatccgaaacaacgctaccaggaa
gacccggtgcggatgctgcgcgccgtgcgtttcgccgccaagctgaatttcggcatcgaa
aaacacagcgccctgccgatccgcgacctggcaccgatgctgcgcgagatcccgtcggcc
cgtctgttcgaagaagtgctcaagctgttcctctccggccacgccgcggacaccttcgag
atgctggtcgacctgcagctgttcgatccgctgttcccggccagtgccgaggcgctggaa
tacaacccgacgtacacccacaccctgatcagcgaagcgctgatcaacaccgacctgcgc
atcaagcagaacaaaccggtgaccccggcgttcctgtttgcagccctgttgtggcctgcc
ctgccggctcgcgtgctgcgtttgcaggaacgtggcatgccgccgattccggcgatgcag
gaagcggcgcacgagctgattgccgaacagtgccagcggatcgcgattccaaaacgcttc
accatgccgatccgcgagatctgggacatgcaggaacgcctgccgcgccgcagcggcaaa
cgcgccgacctgctgctggacaacccgcgtttccgcgccggttacgacttcctgctgctg
cgcgaaagcgctggcgaacagaccgatggcctgggcgaatggtggacggattatcaggac
gccaacgacagcgaacgtcgtgacatgatccgcgacctcagtggcaaggaagacggcact
ggcgcaccacgcaaacgtcgccgcagcggcggtgccaagcgcaaacgtgcagccggcgca
ccgagcaccacgggcgagtaa
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