Pseudomonas sp. MM213: K5R88_16740
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Entry
K5R88_16740 CDS
T11312
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psmd Pseudomonas sp. MM213
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmd03400
]
K5R88_16740 (radA)
DNA repair and recombination proteins [BR:
psmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K5R88_16740 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
RecA_N
AAA
nSTAND_NTPase5
SLFN-g3_helicase
AAA_14
nSTAND3
Rad51
NTPase_1
AAA_24
ABC_tran
MCM
PAXNEB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UCP07480
LinkDB
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Position
complement(3711319..3712686)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGSTFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWTGQQAQIK
TLAEVSVEEIPRFSTASSELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLAKSMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKESPSGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaaacgcatgtacggctgcaccgagtgcggctcaaccttccccaagtgg
gccggccagtgcggcgagtgcggggcctggaacaccttgaccgaaaccatggtcgagagc
ggcggtgccgcagcccccagcggccgcaccggctggaccggccaacaggcacagatcaag
accctggccgaagtcagcgtcgaagaaataccgcgcttttccactgcatccagtgagctc
gatcgcgtcctgggtggcgggctggtggacggttcggtggttttgatcggcggtgatccg
ggcatcggcaaatcaaccatcctcttgcaaaccttgtgcaacctcgccaagagcatgccg
gcgttgtacgtcacgggcgaagagtcccagcagcaagtggccatgcgcgcccgacgcctg
ggattaccgcaggatcaactgcgggtcatgaccgaaacctgcatcgaaaccatcatagcc
accgcccgggtcgaaaagcccaaggtcatggtgatcgactcgattcagacgattttcacc
gagcagctgcaatcggcaccgggcggcgtgtcccaggtgcgggagagcgcggccttgctg
gtgcgttatgccaaacagagtggcacagccatttttctggttggccacgtgacgaaagaa
ggtgcgctggccggaccgcgcgtgctggagcacatggtcgataccgtgctgtatttcgag
ggcgaatccgacggtcgcttgcgcttgctgcgggcggtgaagaaccgttttggcgcggtc
aacgaactgggcgtgttcggcatgaccgacaagggtttgaaagaagtctccaacccttcg
gcgatttttcttactcgtgcacaggaagaagtcccgggcagtgtggtcatggcaacgtgg
gaagggacccgaccgatgctggtggaggttcaggcgttggtggatgacagccatctggcc
aacccgcgtcgggtcacgttggggctggatcagaaccgactggcgatgttgctggcggtt
ctgcatcgacacggcggcattccgacccacgaccaggacgtgttcctcaacgtggtgggt
ggcgtgaaggtgttggaaaccgcatccgacctggcgctgatggcggcggtcatgtccagt
ttgcgcaaccggccattgccccatgatctgctggtgttcggcgaagtcggtttgtctggc
gaagtgcgtccggtgccgagcgggcaggaacgcttgaaagaagcggccaagcacggcttc
aaacgggccatcgtgcccaagggcaatgcgccgaaggagtctccgtcgggattgcagatt
attgccgttacccgcctcgaacaggccctcgacgccctgttcgaataa
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