Pseudomonas sp. MM213: K5R88_17160
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Entry
K5R88_17160 CDS
T11312
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00550
Peptidoglycan biosynthesis
psmd01100
Metabolic pathways
psmd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5R88_17160 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K5R88_17160 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
K5R88_17160 (mrdA)
Enzymes [BR:
psmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K5R88_17160 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K5R88_17160 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UCP07557
LinkDB
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Position
complement(3800382..3802277)
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AA seq
631 aa
AA seq
DB search
MSQPIRIKDHEKDARLVRGRVVFGAIAVVVLIGVLIARLYFLQVIQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQVLDVIVEVLELTPEDRVIFE
KRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYM
GRINEKELKSLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISF
KAYSELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASTRVFDPGYYMLPNY
DHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFGIGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQSTPLQLAQATALVANKGVWNRPHL
AKTVEGERPKDDNPMPDIILRDPSDWTRVNHGMQQVMHGARGTARKASIGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADDPKIVVSVMVENGESGSGVAAPVVR
QVMDAWLLDQDGRLKAEYASPISAEATAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgatccgcatcaaggaccacgaaaaagacgcccgtctggtgcgtggccgc
gtcgtgttcggggccattgcagtggtggtgctgatcggcgtgctgatcgctcgcctgtat
ttcctccaggtgatccagtacgagtaccactcgaccctgtcggaaaacaaccgcgtccat
gtgcagccgattccgccgacccgcggattgatcttcgaccgcaatggcgtggtggtggcc
gacaaccggcccagcttcagcctgagcatgacccgcgagcgttccggcgactggcagcaa
gtgctcgacgtgatcgtcgaagtgctggaactgacgcccgaggatcgggtgatcttcgag
aaacgcatgcgccaggggcgtcggccattcgagccggtgccgatcctgttcgagctgacc
gaagagcagatcgcccgcatcgccgtgaaccagttccgcctcccgggtgtggaagtggtt
gcgcagctggtgcggcattacccgcagggcgcgcactttgcgcactcggtgggttacatg
gggcggatcaacgagaaagagctgaagtctctcgatccggtcaattacagcggcacccac
cacatcggcaagaccggcatcgagcgtttctacgagcccgaactgcatggccaggtgggt
tacgaagaagtcgaaaccaacgcacgaggccgcgttctgcgggtgctcaagcgtaccgat
ccgattcccggcaaggacatcgtcctgagcctggacatcaagttgcaggaagcggccgaa
gcggcactcggcggtcgccgtggtgcggtggtcgcgctggacccgaaaaccggcgaagtg
ctggcaatggtcagtcagccgagtttcgacccgaacctgtttgtgaccggcatcagcttc
aaggcttattccgaactgcgtgattccatcgaccggccgttgttcaaccgcgtgctgcgt
ggcctttacccaccgggttcgaccatcaagccagcggtggccattgcgggcctggactcg
ggcgttgtcaccgcgtcgaccagggtcttcgaccccggctactacatgctgcccaattac
gatcacaagtatcgcaactggaaccgtaccggtgacggctacgtcgatctggacacggcg
atcatgcggtccaacgacacctacttctatgacctggcccacaagctggggattgatcgc
ttgtcggcctacatgggcaagttcggcatcggccaaaaggtctcgctggacatgttcgaa
gagtcgccggggctgatgccgtcccgtgagtggaagcgtgcgacccggcgccaggcctgg
ttcccgggtgaaacgctgattctcgggatcggtcagggctacatgcaatccacgccgctg
caactggcccaggccacggcgctggtggccaacaaaggtgtgtggaaccgtccgcacctg
gccaagactgtcgaaggcgagcggccgaaggatgacaatccgatgccggacatcatcctg
cgcgatccgtccgactggacccgggtcaaccacggcatgcagcaagtgatgcacggtgcg
cgcggtacggcgcgcaaggcttcgatcggcgcgcaataccggatcgccggcaaaagtggt
accgcccaggtggtcgcgatcaagcagggcgagaagtacgaccgctcgaaggttcaggag
cgtcatcgcgaccacgccttgtttgtcggctttgcgccggccgacgacccgaaaatcgtg
gtgtcggtgatggtcgagaacggcgagtccggttcaggcgtcgccgcgcctgtggtgcgt
caagtcatggacgcctggctcctcgaccaggacggccgactgaaagccgaatacgccagc
cctatcagtgcggaggctacggcccgtgaagagtaa
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