KEGG   Pseudomonas sp. MM213: K5R88_20420
Entry
K5R88_20420       CDS       T11312                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
psmd  Pseudomonas sp. MM213
Brite
KEGG Orthology (KO) [BR:psmd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psmd02044]
    K5R88_20420 (tssF)
Secretion system [BR:psmd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K5R88_20420 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UCP08172
LinkDB
Position
complement(4486302..4488089)
AA seq 595 aa
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
DELPELSHSLMHLLWPNYMRPLPAFSILQFDPLKRSGPALRVERDTPIESVPIDDVRCRF
RTCYPTEVLPLDLAALNYSVKGDGSLLSLRLEMSADGHLGELELSRLRLHFAGERYISQM
LYLSLLRNLEGIELIPLDGAGKPINGVNGTPMAFKMPGDRVQPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDINGLDLLKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLD
NVKLYCTPIVNLFKHDALPIRLDGKQDEYLLLPAEFDLQNCGVFSVETVTGWKPGGLGYQ
EYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYLSFGIRHTEAHETLSIELMCT
NQNLPRKLKLGDICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKSIKHHHVDRLHRGLPVRGLRTELTID
PEGYIGEGDLFVFASVLNEFFALYASLNSYHELRVKSTQGEVYQWTPRMGLQPLL
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgtcctttaaccactactaccaaagcgaactcaccgcacttcgccagttaggtcgtcga
ttcgccgagcgtagcccggcgttggcgcctttcctcggtcaggccggccgagatccagac
gtggagcggttgctggagggttttgcattcctgaccggtcgcctgcgtcagaagctcgac
gatgaactgccagagctcagccattccctgatgcacctgctgtggcccaactacatgcgg
ccgctgccagcgttcagcattttgcagttcgacccgttgaagcgttcggggcccgcgttg
agggtcgagcgcgacacgccaatcgagagcgtgccgatcgatgacgtgcgttgccgcttc
cgtacctgctacccgaccgaagtcttgccgctggatctggccgcgctgaattactcggtg
aagggcgacggttcgctgttgagcctgcgtctggagatgagtgctgacggtcacctcggt
gagttggaactgagccgcctgcgtctgcacttcgccggtgagcgctacatcagccagatg
ctgtacctgagcctgctgcgcaatctggaaggcatcgagctgatcccgctggacggcgcc
ggcaagcccatcaacggtgtcaacggcacgccgatggcgttcaagatgcccggcgaccgt
gtgcagccggtgggttttgccgaagaagaagcgttgatcccgtatccgctgaacaccttc
cgcggctatcgctacttgcaggaatacttcgccttccaggacaaattcctcttcgtcgac
atcaacggtctggatctgctcaaagcattgccggaagacacgctcaagcagatgcgcggc
ctcgaattgcgcttcgacattcgcaagagcggcatcatgcgcatgcgtccgacgctggat
aacgtgaagctctattgcacgcccatcgtcaacctgttcaagcacgacgccttgccgatc
cgcctcgacggcaagcaggacgaatacctgctgctgcccgccgaattcgatctgcaaaat
tgcggcgtgttctcggtggaaaccgtgaccggctggaagcccggcggcctcggttatcag
gagtacgtgccgttcgaatccttcgagcacgacccgagtttcgacgtgcccaacagccgt
ccgcattacagcattcgccagcgttcctccttgctgcacgacggcctcgacacctacctg
agcttcggcatccgccacaccgaagcccatgaaaccctgtcgatcgagctgatgtgcacc
aaccagaacctgccgcgcaagctcaagctcggcgacatctgcatggcctgtgaagagacg
ccggagtttttgagcttccgcaacatcaccccggccacgtcgagtttcgcgccgccgctg
aaccgcgacttcctctggaagttgatcagcaacatgtcgcttaactatttgtccctggcc
gacgtcaatgcgttgaaggtgattctcgaaacttacgatttgccgcgctactacgaccaa
cacgcggaaaaagtcagcaagcgcctgctcggcgggctcaagtcgatcaagcaccaccac
gtcgaccggttgcaccgagggttgccggttcgcgggttgcgcaccgagctgaccatcgac
ccggaagggtatatcggcgagggcgacttgttcgttttcgcttcggttctcaacgagttt
ttcgcgctttacgccagtctcaattcgtaccacgagctgcgggtaaaaagcacacaggga
gaggtgtaccaatggacaccacgtatgggcctgcagccgcttctttaa

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