Pseudomonas sp. MM213: K5R88_24935
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Entry
K5R88_24935 CDS
T11312
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00220
Arginine biosynthesis
psmd00240
Pyrimidine metabolism
psmd00250
Alanine, aspartate and glutamate metabolism
psmd01100
Metabolic pathways
psmd01110
Biosynthesis of secondary metabolites
psmd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K5R88_24935 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K5R88_24935 (carB)
00220 Arginine biosynthesis
K5R88_24935 (carB)
Enzymes [BR:
psmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
K5R88_24935 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
UCP09019
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All DBs
Position
5519114..5522335
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM
NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLP
RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKLDLGNPES
MSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLG
LASIDRDLMFKLKRKGFSDMRLAKLLGVTEKALRRHRHKLEIFPVYKRVDTCAAEFATDT
AYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLARALEEAGVPI
IGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAAAKIGYPLVVRPSYVLG
GRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIE
VNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVA
RDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacattaaaagcatcctgattctcggcgctggcccgatcgttatc
ggtcaggcctgcgaattcgactactccggcgcccaggcctgcaaagccctgcgcgaagag
ggttaccgcgtcatcctggtgaactccaacccagcgaccatcatgaccgacccggacatg
gccgacgccacctacatcgaaccgatcaaatggcagaccgttgccaaaatcatcgagaaa
gagcgtccggacgcgctgctgccaaccatgggcggccagaccgctctgaactgcgcactg
gacctggagcgcgaaggcgttctggagaagttcggcgtagagatgatcggcgccaacgct
gacaccatcgacaaggctgaagaccgttcgcgcttcgacaaggcgatgaaatccatcggc
ctggactgcccgcgctcgggtatcgcccacagcatggaagaggccaacgccgttcttgaa
cgcttgggcttcccgtgcatcatccgtccgtccttcaccatgggcggcaccggcggcggt
atcgcttacaaccgtgaagagttcgaagaaatctgcgcccgtggcctggacctgtcgccg
accaaagagctgctgatcgacgaatccctgatcggctggaaagaatacgagatggaggtt
gtccgcgataagaaggacaactgcatcatcgtctgctccattgaaaactttgacccgatg
ggcgtgcacaccggtgactcgatcactgttgcgccggcacagaccctgacggacaaggaa
taccagatcatgcgtaacgcctccctggcggtactgcgcgagatcggcgtggaaaccggc
ggctccaacgttcagttcggcatctgcccggacactggccgcatggtcgtcatcgagatg
aacccacgggtatcccgttcctcggccctggcctcgaaagccaccggtttcccgattgcg
cgtatcgctgccaagttggcgatcggctataccctggacgagctgcagaacgaaatcacc
gggggcgctactccggcgtcgttcgagccgtcgatcgactacgtcgtcaccaagctgccg
cgtttcgccttcgagaaattcccgaaagccgacgcacgcctgaccactcaaatgaagtcg
gtcggtgaagtcatggccatcggtcggaccttccaggaatccctgcagaaagccctgcgc
ggcctggaagtgggcgtttgcggcctggacgagaagctcgacctgggcaacccggaaagc
atgagcatcctcaagcgcgaactgaccgtgccgggcgccgagcgcatctggtacgtggct
gacgccttccgcgccggcctgtcggtcgaagacattttcggtatgaacatgatcgacccg
tggttcctggtacagatcgaagatctgatcaaggaagaagagaaggtcaagaccctgggt
ctggccagcatcgaccgcgacctgatgttcaagctcaagcgcaaaggcttctcggacatg
cgtctggccaagctgctgggtgtgaccgaaaaagctttgcgtcgccaccgtcacaagctg
gagatcttcccggtctacaagcgcgttgacacctgcgctgccgagttcgccaccgacacc
gcctacatgtactcgacttacgaggaagagtgcgaagccgcgccgtcgggccgcgacaag
atcatgatcctcggcggcggtccaaaccgtatcggccagggcatcgagttcgactactgc
tgcgtacacgcggcactggccctgcgcgaagacggttacgagaccatcatggtcaactgc
aacccggaaaccgtttccaccgactacgacacctccgatcgcctgtacttcgaaccagta
accctggaagacgtgctggaaatctgccgggtcgagaagccgaaaggcgtgatcgtccag
tacggcggccagactccactgaaactggctcgcgccctggaagaagccggcgtgccgatc
atcggtaccagccctgacgccatcgaccgtgccgaagaccgtgagcgcttccagcaaatg
gttgagcgtctgaacctgcgtcagccgccaaacgccaccgtgcgcagcgaagacgaagcg
attcgtgccgcggccaagatcggttacccgctggtggtgcgtccgtcctacgtactgggc
ggccgtgcgatggaaatcgtctacgaagaagaagaactcaagcgctacctgcgtgacgca
gtgaaagtgtccaacgacagcccggtgctgcttgaccacttcctcaactgcgccatcgag
atggacgtggatgcggtctgcgacggcaccgacgtggtgatcggcgcgatcatgcagcac
atcgagcaggctggtgttcactccggtgactccgcatgctccctgccgccgtactcgctg
cctgcgcacatccaggacgagatgcgcgaacaggtcaagaaaatggccctggagctgggc
gttgtcggtctgatgaacgtgcagttggcgctgcaaggcgaagacatctacgtcatcgaa
gtcaacccgcgcgcttcccgtaccgtaccgttcgtgtcgaagtgcatcggtgtttccctg
gcaatgatcgcggcacgcgtcatggccggtaaaaccctgaaagaaatcggcttcaccaaa
gaaatcatcccgaacttctacagtgtgaaagaggcggtcttcccgttcgccaaattccct
ggcgtggacccgatcctgggcccagagatgaagtccaccggtgaagtgatgggcgtgggc
gataccttcggcgaagcgttcgccaaggctcagatgggcgccagcgaagtgctgccgacc
ggcggtaccgcgttcatcagcgtgcgtgacgacgacaagccactggttgcaggcgtggcc
cgtgatctgatcaacttgggcttcgaagtggttgccactgccggtactgccaagctgatc
gaagccgcaggcctgaaagtgcgccgtgtgaacaaggtgactgaaggtcgtccgcacgtg
gtcgacatgatcaagaatgacgaagtcaccctgatcatcaacaccaccgaaggtcgccag
tcgattgctgactcgtactccattcgtcgtaatgccttgcagcacaaaatctactgcacc
accaccattgctgctggcgaagccatctgcgaagcgctgaagttcggtcccgagaagacc
gtacgccgcttgcaggatctacacgcaggattgaaggcatga
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