Pseudomonas sp. MM213: K5R88_25015
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Entry
K5R88_25015 CDS
T11312
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psmd Pseudomonas sp. MM213
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmd03016
]
K5R88_25015 (truB)
Enzymes [BR:
psmd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K5R88_25015 (truB)
Transfer RNA biogenesis [BR:
psmd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5R88_25015 (truB)
Prokaryotic type
K5R88_25015 (truB)
BRITE hierarchy
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GFIT
Other DBs
NCBI-ProteinID:
UCP09032
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Position
5535349..5536266
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRSDVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHSGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcattattctgctcgacaaaccg
ctggggttcacttccaacgcggcgttgcagaaggttcgctggttgctgaacgccgagaag
gccgggcacaccggcagtcttgatccgctggccaccggcgtgttgccgttgtgcttcggt
gaggcgaccaagttctcgcaatacctgctcgattccgacaagggttatgaaaccctggcg
cagctgggcaaaaccaccaccacggcggatgccgaaggtgaagttttgcaggagcgcccg
gtgaccgttggtcgatccgatgtcgaagcggtgctgccgaaatttcgtgggcaaatcagt
cagataccgccgatgtactcagcgctcaagcgtgatggccagccgctgtacaagctggca
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgaaggtgatactgcgcggcttgcggtggattgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggtgagcaactcggttgtggcgcttacgttgctgaattg
cgacgtacccaggccgggcctttcacgctggcgcagactgtcacgcttgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggcctgctggattggccactgctgcagttctcggaagcgagcgcgttctactggctcaac
ggccagccggttcgcgccccggatgctccgaagttcggcatggtacgggtacaggatcac
agtggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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