Pseudomonas sp. MM213: K5R88_27170
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Entry
K5R88_27170 CDS
T11312
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psmd Pseudomonas sp. MM213
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmd03016
]
K5R88_27170 (truD)
Enzymes [BR:
psmd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K5R88_27170 (truD)
Transfer RNA biogenesis [BR:
psmd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5R88_27170 (truD)
Prokaryotic type
K5R88_27170 (truD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UCP09441
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Position
6010176..6011234
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AA seq
352 aa
AA seq
DB search
MNELQLLGPRAYGEALGTAVLKATAEDFQVDEVLNIPLSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTGRHKR
KLQRGAHSANGFTLRLTQFAGDKAAIDARLQLIAKQGIPNYFGAQRFGFDGGNVVDARSW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAMGAVHELEQAIAAREADLRDWLINAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaattgcttggcccgcgtgcctatggtgaagccctcggcaccgctgta
ctgaaagctacggcggaagatttccaggtcgatgaagtcctcaatattcctctcagcggc
gacggcgagcacctgtggatctgggtggaaaaacgcggcctgaataccgaagaggcagca
cgtcgaatcgccaaggcggcgggcgtgccgttgcgcaccgtcagttacgccggtctcaag
gatcgtcaggcgttgacgcgtcagtggttcagcgtgcaactgccgggcaaggctgaccct
gatctgtcggcggcggaaaacgatacgctgaaaatcctcaagaccggtcggcacaaacgc
aagctgcaacgcggtgcccactcggccaacggtttcaccttgcgtctcacgcaattcgct
ggcgacaaagcggcgatcgatgcgcgtctgcaactgatcgccaaacaaggtattccgaat
tatttcggcgcccagcgtttcggctttgacggtggcaacgtggtcgatgcccgtagctgg
gccgcgcgcaaggccttgccggagcagcgcaacgtgcgttcgcgtctgctttccaccgcc
cgcagttttctgtttaaccaagtgttggcggcgcgcgttgctgatggcacctggcagcaa
gcgcaggttggcgatctgttggcgtttaccgacagccgcagtttttttccggccggtgag
gccgagtgcagcgacccgcgactggcgattctagacctgcacccgaccggcccgcagtgg
ggtgaaggtgactcgccggcgatgggcgctgtccatgaactggagcaggcaatcgccgcc
cgcgaagcagaccttcgcgattggttgattaatgccggaatgagccacgaacgtcgcatc
ctgcggctgcccattggtgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccggccggatgctttgccactgtattggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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