Pseudomonas sp. MM213: K5R88_29485
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Entry
K5R88_29485 CDS
T11312
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00010
Glycolysis / Gluconeogenesis
psmd00020
Citrate cycle (TCA cycle)
psmd00260
Glycine, serine and threonine metabolism
psmd00280
Valine, leucine and isoleucine degradation
psmd00310
Lysine degradation
psmd00380
Tryptophan metabolism
psmd00620
Pyruvate metabolism
psmd00630
Glyoxylate and dicarboxylate metabolism
psmd00640
Propanoate metabolism
psmd00670
One carbon pool by folate
psmd00785
Lipoic acid metabolism
psmd01100
Metabolic pathways
psmd01110
Biosynthesis of secondary metabolites
psmd01120
Microbial metabolism in diverse environments
psmd01200
Carbon metabolism
psmd01210
2-Oxocarboxylic acid metabolism
psmd01240
Biosynthesis of cofactors
Module
psmd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psmd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
psmd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
psmd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
K5R88_29485 (lpdA)
00020 Citrate cycle (TCA cycle)
K5R88_29485 (lpdA)
00620 Pyruvate metabolism
K5R88_29485 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
K5R88_29485 (lpdA)
00640 Propanoate metabolism
K5R88_29485 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K5R88_29485 (lpdA)
00280 Valine, leucine and isoleucine degradation
K5R88_29485 (lpdA)
00310 Lysine degradation
K5R88_29485 (lpdA)
00380 Tryptophan metabolism
K5R88_29485 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
K5R88_29485 (lpdA)
00670 One carbon pool by folate
K5R88_29485 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psmd04147
]
K5R88_29485 (lpdA)
Enzymes [BR:
psmd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
K5R88_29485 (lpdA)
Exosome [BR:
psmd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
K5R88_29485 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
GIDA
HI0933_like
FAD_binding_3
NAD_binding_8
AlaDh_PNT_C
3HCDH_N
Thi4
DAO
2-Hacid_dh_C
Amino_oxidase
Pro_N
Motif
Other DBs
NCBI-ProteinID:
UCP09880
LinkDB
All DBs
Position
6498320..6499756
Genome browser
AA seq
478 aa
AA seq
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MTQKFDVVVIGAGPGGYVAAIKAAQLGLTTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKEGFAIHGINHAGVTMDVSAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVELTKPDGSVEIIEAENVILASGSRPIDIPPAPVDQKVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGAEVVVLEALEKFLPAADDAVSKEAYKTLTKQGLDIK
LGARVTGSKVNGDEVVVNYTDANGEQSITFDKLIVAVGRRPVTTELLAADSGVTIDERGF
VFVDDQCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQINYDLIPSVIYTH
PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaaattcgacgtggtagtgattggcgcgggccctggcggttacgtggctgcc
attaaagcagcgcaactgggcctcaccactgcctgcatcgagaaatacaccgacaaggaa
ggcaaactggccctcggcggtacttgcctgaacgtcggttgcattccatccaaggcgctg
ctggacagctcctggaaatacaaggaagccaaagaaggcttcgcgatccacggtatcaat
cacgctggcgtgaccatggacgtgtcggcaatggttggccgtaaagccaacatcgtcaaa
ggcctgacctctggcgttgccaccctgttcaaggcgaacggcgtcacttccctgcaaggc
cacggcaaactgctggccggcaagaaagtcgaactgaccaagccagacggcagcgttgaa
atcatcgaagccgagaacgtgattctggcttcgggttcgcgcccgatcgacattccaccg
gctcctgttgaccagaaagtgatcgtcgattcgaccggcgcactggaattccaatccgta
cccaagcgtctgggcgttatcggcgctggcgtaatcggtctggaactgggttcggtatgg
tcgcgcctgggcgctgaagtggttgttctggaagcgctggagaagttcctgccggctgct
gacgacgccgtttccaaagaagcctacaaaaccctgaccaaacaaggtctggacatcaag
ctgggcgctcgcgtcaccggttccaaagtgaacggcgacgaagtcgttgtgaactacacc
gacgccaacggcgaacagagcatcacctttgacaagctgatcgttgccgttggtcgccgt
ccagtgaccaccgaactgttggctgccgacagcggtgtgaccatcgacgagcgcggtttc
gtattcgttgacgaccagtgcgctaccagcgtaccgggcgtttacgcgatcggtgacgtg
gttcgcggcatgatgctggcgcacaaggcgtccgaagaaggcatcatggtggttgagcgc
atcaagggccacaaagcgcaaatcaactatgacctgatcccttcggttatttatactcac
ccggaaatcgcatgggtcggcaaaaccgagcagaccttgaaggctgaaggcgttgaagtt
aacgttggcaccttcccgttcgcagccagtggccgtgccatggcagccaacgacaccggc
ggtttcgtgaaagtcattgccgatgccaagactgaccgcgtattgggcgtccacgtgatt
ggcccgagcgctgcagaactggttcagcagggcgcgatcggcatggaattcggcaccagc
gctgaagacctgggcatgatggttttctcccatccgaccctgtctgaagccttgcacgaa
gcagctctggctgtgaatggcggcgccatccacatcgccaaccgcaagaagcgttaa
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