KEGG   Pseudomonas sp. MM213: K5R88_29485
Entry
K5R88_29485       CDS       T11312                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
psmd  Pseudomonas sp. MM213
Pathway
psmd00010  Glycolysis / Gluconeogenesis
psmd00020  Citrate cycle (TCA cycle)
psmd00260  Glycine, serine and threonine metabolism
psmd00280  Valine, leucine and isoleucine degradation
psmd00310  Lysine degradation
psmd00380  Tryptophan metabolism
psmd00620  Pyruvate metabolism
psmd00630  Glyoxylate and dicarboxylate metabolism
psmd00640  Propanoate metabolism
psmd00670  One carbon pool by folate
psmd00785  Lipoic acid metabolism
psmd01100  Metabolic pathways
psmd01110  Biosynthesis of secondary metabolites
psmd01120  Microbial metabolism in diverse environments
psmd01200  Carbon metabolism
psmd01210  2-Oxocarboxylic acid metabolism
psmd01240  Biosynthesis of cofactors
Module
psmd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
psmd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmd_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
psmd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
psmd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:psmd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    K5R88_29485 (lpdA)
   00020 Citrate cycle (TCA cycle)
    K5R88_29485 (lpdA)
   00620 Pyruvate metabolism
    K5R88_29485 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    K5R88_29485 (lpdA)
   00640 Propanoate metabolism
    K5R88_29485 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    K5R88_29485 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    K5R88_29485 (lpdA)
   00310 Lysine degradation
    K5R88_29485 (lpdA)
   00380 Tryptophan metabolism
    K5R88_29485 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    K5R88_29485 (lpdA)
   00670 One carbon pool by folate
    K5R88_29485 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psmd04147]
    K5R88_29485 (lpdA)
Enzymes [BR:psmd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     K5R88_29485 (lpdA)
Exosome [BR:psmd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   K5R88_29485 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored GIDA HI0933_like FAD_binding_3 NAD_binding_8 AlaDh_PNT_C 3HCDH_N Thi4 DAO 2-Hacid_dh_C Amino_oxidase Pro_N
Other DBs
NCBI-ProteinID: UCP09880
LinkDB
Position
6498320..6499756
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGLTTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKEGFAIHGINHAGVTMDVSAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVELTKPDGSVEIIEAENVILASGSRPIDIPPAPVDQKVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGAEVVVLEALEKFLPAADDAVSKEAYKTLTKQGLDIK
LGARVTGSKVNGDEVVVNYTDANGEQSITFDKLIVAVGRRPVTTELLAADSGVTIDERGF
VFVDDQCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQINYDLIPSVIYTH
PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgactcagaaattcgacgtggtagtgattggcgcgggccctggcggttacgtggctgcc
attaaagcagcgcaactgggcctcaccactgcctgcatcgagaaatacaccgacaaggaa
ggcaaactggccctcggcggtacttgcctgaacgtcggttgcattccatccaaggcgctg
ctggacagctcctggaaatacaaggaagccaaagaaggcttcgcgatccacggtatcaat
cacgctggcgtgaccatggacgtgtcggcaatggttggccgtaaagccaacatcgtcaaa
ggcctgacctctggcgttgccaccctgttcaaggcgaacggcgtcacttccctgcaaggc
cacggcaaactgctggccggcaagaaagtcgaactgaccaagccagacggcagcgttgaa
atcatcgaagccgagaacgtgattctggcttcgggttcgcgcccgatcgacattccaccg
gctcctgttgaccagaaagtgatcgtcgattcgaccggcgcactggaattccaatccgta
cccaagcgtctgggcgttatcggcgctggcgtaatcggtctggaactgggttcggtatgg
tcgcgcctgggcgctgaagtggttgttctggaagcgctggagaagttcctgccggctgct
gacgacgccgtttccaaagaagcctacaaaaccctgaccaaacaaggtctggacatcaag
ctgggcgctcgcgtcaccggttccaaagtgaacggcgacgaagtcgttgtgaactacacc
gacgccaacggcgaacagagcatcacctttgacaagctgatcgttgccgttggtcgccgt
ccagtgaccaccgaactgttggctgccgacagcggtgtgaccatcgacgagcgcggtttc
gtattcgttgacgaccagtgcgctaccagcgtaccgggcgtttacgcgatcggtgacgtg
gttcgcggcatgatgctggcgcacaaggcgtccgaagaaggcatcatggtggttgagcgc
atcaagggccacaaagcgcaaatcaactatgacctgatcccttcggttatttatactcac
ccggaaatcgcatgggtcggcaaaaccgagcagaccttgaaggctgaaggcgttgaagtt
aacgttggcaccttcccgttcgcagccagtggccgtgccatggcagccaacgacaccggc
ggtttcgtgaaagtcattgccgatgccaagactgaccgcgtattgggcgtccacgtgatt
ggcccgagcgctgcagaactggttcagcagggcgcgatcggcatggaattcggcaccagc
gctgaagacctgggcatgatggttttctcccatccgaccctgtctgaagccttgcacgaa
gcagctctggctgtgaatggcggcgccatccacatcgccaaccgcaagaagcgttaa

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