Pseudomonas sp. ML2-2023-3: V6P94_02115
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Entry
V6P94_02115 CDS
T10712
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00521
Streptomycin biosynthesis
psml00523
Polyketide sugar unit biosynthesis
psml00525
Acarbose and validamycin biosynthesis
psml00541
Biosynthesis of various nucleotide sugars
psml01100
Metabolic pathways
psml01110
Biosynthesis of secondary metabolites
psml01250
Biosynthesis of nucleotide sugars
Module
psml_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V6P94_02115 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
V6P94_02115 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
V6P94_02115 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
V6P94_02115 (rfbB)
00525 Acarbose and validamycin biosynthesis
V6P94_02115 (rfbB)
Enzymes [BR:
psml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
V6P94_02115 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WWT71492
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Position
486028..487110
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AA seq
360 aa
AA seq
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MRILVTGGAGFIGSALIRHLIKNTGHEVLNLDKLTYAGNLESLQSIATDTRYEFVQADIV
DQAAVSAIIARFEPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAARAYWLTLPE
PEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWNRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQTNIDVVRSICALLEELAPVHPAGVAQFADLITFVKDRPGHDQRY
AIDASKIERELGWVPEETFETGLRKTVQWYLDNLDWCRRVQDGSYQGERLGCTDPKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttagtcaccggcggcgccggttttattggttcagcgctgatccgtcacctg
atcaaaaacaccggtcacgaagtcctcaatctcgacaagttgacctacgccggtaatctt
gaatcgctgcaaagcattgccaccgatacccgctacgagttcgtacaggccgatatcgtc
gaccaggccgctgtcagtgcaatcattgcgcgcttcgagccacaggcgatcatgcacctg
gcggccgagtcccacgttgaccgctccatcgacggcccgtccgactttatccagaccaat
atcgtcggcacctacagcctgctcgaagccgcccgtgcttactggctgaccctgcctgaa
ccggaaaaaagcgcgtttcgcttccaccatatttcgaccgacgaagtgtatggcgacctg
catggcgtcgatgacctgttcaccgagaccacgccttacgcgccaagctcgccgtactcg
gccagtaaagcggcatccgaccacctggtccgcgcctggaaccgcacttacggcttgccg
gtgttgttgaccaactgctcaaacaactacggcccgttccatttcccggaaaagctgatc
ccgctggtgatcctcaacgccctggccggtaagccgctgccggtgtacggcaatggcctg
caagtacgtgactggctgttcgtggaagaccacgcccgtgccttgttgaaggtcgtgacc
gaaggcgtggttggcgagacttacaacatcggcgggcacaacgagcaaaccaatatcgac
gtggtacgcagcatctgtgccttgctcgaagaactggcgccagtgcacccggcgggtgtt
gcacaatttgccgacctgatcaccttcgtcaaggatcgtccgggccacgaccagcgctac
gcgatcgatgccagcaaaatcgaacgcgagctgggctgggtacccgaagaaaccttcgaa
accggcctgcgcaaaaccgtgcagtggtatctggataacctggactggtgtcgccgggtt
caagacggcagctatcaaggcgagcgcctgggctgcactgatcccaaggacttgatcgca
taa
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