Pseudomonas sp. ML2-2023-3: V6P94_02875
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Entry
V6P94_02875 CDS
T10712
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml03420
Nucleotide excision repair
psml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V6P94_02875 (uvrD)
03430 Mismatch repair
V6P94_02875 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_02875 (uvrD)
Enzymes [BR:
psml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6P94_02875 (uvrD)
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6P94_02875 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
V6P94_02875 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WWT71624
LinkDB
All DBs
Position
645965..648148
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVTASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSVL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPKHIQASGDLFLATMRNIYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSTDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLAHSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRQLIANKALPGRASGAISGFIELIENLAAKVMEMPLH
LMTQTVIEQSGLIAYHQAEKGEKGQARVENLEELVSAARNFENNDEDEELSPLAALLGHA
SLEAGDTQAEEHEDGIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
KQSASSLFGGSEIPETEFKLGQMVKHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcttgttaaattctctcaacgatgcccaacgtcaggccgtc
acggccagtgtggggcgtcagttggttctggccggcgcaggttccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtcgccgcactcagtcctg
tcggtgacattcaccaacaaggccgccgccgagatgcgccaccgcatcgagcaactgatg
ggtatcaacccggcgggcatgtgggtcggcaccttccacgggctggcacaccgtttattg
cgggctcactggcaagaagccgggctgagccagacctttcagatcctcgacagcgatgac
cagcaacgtctggtcaagcgcgtgatccgtgaactggggctggatgaacagcgctggccg
gtgcgtcaggcgcagtggtttatcaacggtcaaaaagacgaaggcctgcgtcctaaacat
atccaggccagcggcgacttgttcctggccaccatgcgcaatatttacgaggcctatgag
gtcgcgtgccagcgtgccggtgtcatcgacttttccgagctactgctgcgcgccctggat
ctgtggcgcgacaacccgggcttgctggcgcactaccagaaacgcttccgccacattctt
gtcgacgaattccaggacaccaacgccgttcaatatgcctggctgcgattgctggcccag
ggcggcgacagcctgatggtcgtgggcgatgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgaaaatatctaccagtactcaaccgatttcccggacgccgagaccattcgc
ctggagcagaactatcgctccacggcaggcatcctcaaagcggccaacgccctgattgcc
aacaacaccggacgcatgggcaaagagctgtggactgacggcggtgaaggcgaagcaatt
aatttgtacgcagccttcaatgaacacgatgaagcgcgctacgtggtcgagaccatcgaa
agcgccttgaaaaccggcctggcccatagcgatatcgccattttgtaccgctccaacgcc
caatcgcgggtgcttgaagaagcgttgctgcgcgaacgtattccttaccgcatttatggt
ggccagcgcttcttcgagcgcgcagaaatcaaaaacgccatggcttacatgcgcctgctc
gaaggccgtggcaatgatgccgcgctggagcgggtgattaacgtgcctgcccgcggtatc
ggcgaaaaaaccgtcgaggccattcgcgatcacgcacgtcacagcgatgtgtcgatgtgg
gaggcgatgcgccagctaattgccaataaagccctccccggtcgtgcttcaggcgccatt
tccggctttattgaactgatcgagaacctcgcggcaaaagtcatggagatgcctctgcat
ctgatgacccaaaccgtgatcgaacagagtgggctgattgcctaccatcaggcggaaaaa
ggcgaaaaaggccaggcccgggtagaaaaccttgaagaactggtcagcgcagcgcgcaac
ttcgagaacaatgacgaagatgaagagctgtcgccattggccgccctccttggtcatgcc
tcactggaggctggcgatacccaggccgaagagcatgaagacggtatccagctgatgacg
ctgcacagcgccaagggtctggagtttccgtatgtgttcctggtgggcatggaagaaggc
ttgttcccgcacaagatgagcctggaagaacccggccgccttgaagaggagcggcgtctg
gcttacgtgggcattacccgcgccatgcaaaatctggtcatgacgtacgctgaaacccga
cgcctgtacggtagcgagacctacaacaaggtttcgcgcttcgtgcgagaagtgccaaaa
ggcctgatccaggaagttcgtctgtccaacagcgtcagtcgccctttcggtggtggtcaa
aagcagagcgccagcagcctgtttggcggttcggaaataccagaaaccgaattcaagctt
ggccagatggtcaagcacgcggtctttggcgaaggcgtcattctcaacttcgaaggcgca
ggcgcgcaggcgcgggtacaggtgaacttctccgaaggcagcaaatggctgatgatgggc
tacgccaaacttgaagcggtctga
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