Pseudomonas sp. ML2-2023-3: V6P94_03820
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Entry
V6P94_03820 CDS
T10712
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6P94_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_03820
Enzymes [BR:
psml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
V6P94_03820
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
V6P94_03820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
WWT71803
LinkDB
All DBs
Position
836779..837558
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQTAVERGLLSWLQAQNADVICLQDTRASAFELDDPAYQLDGYFLYACEA
EVPAQGGVALYSRLQPKAVITGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcagacggcagtcgagcgcggtttgctc
agttggctgcaagctcagaatgccgacgttatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatccagcttaccagctcgatggctactttctttatgcctgcgaagct
gaagtccctgcccaaggcggtgtggctttgtattcgcggttgcaaccgaaagcagtcatc
actgggcttggcttcgagacggccgatcgctacgggcgctacctgcaagccgatttcgat
aaggtcagcatcgcgaccttgttgctcccttcggggcagaatggcgatgaagacttgaac
cagaagttcaagctaatggacgactttgcgcgctaccttgataagcagcgtcgcaagcgt
cgtgagtacatctactgcggctcgttgtatgtggcgcagcagaagctcgacattaaaaac
tggcgtgacagccagcaatcgcctggtttcctggcgcctgaacgggcctggatggatgag
attgtcggcaacatgggctatgtcgatgccctgcgcgaagtcagtcgtgagggcgatcag
tacagctggtggccggacaacgaacaagccgagatgcttaatctgggctggcgtttcgac
taccagttgctgacaccaggcttgcgtcgctttgtacgaagcgctcgcttgccgcgtcag
ccacggttttcgcaacatgcgccattgatcgtggactacgactggacactgactatctaa
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