Pseudomonas sp. ML2-2023-3: V6P94_05925
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Entry
V6P94_05925 CDS
T10712
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00900
Terpenoid backbone biosynthesis
psml01100
Metabolic pathways
psml01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
V6P94_05925 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psml01006
]
V6P94_05925 (ispA)
Enzymes [BR:
psml01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
V6P94_05925 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
V6P94_05925 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
V6P94_05925 (ispA)
Prenyltransferases [BR:
psml01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
V6P94_05925 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WWT72205
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All DBs
Position
complement(1279888..1280775)
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AA seq
295 aa
AA seq
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MIDAYQISSQARVNAALECLLVAPAPELARLYEAMRYSVMNGGKRVRPLLAYAACQALGS
APEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLNTLDAETRLRMVTALAQAAGPAGMVGGQAIDLGSVGMKLDQAALENMHRHK
TGALIEASVQLGALASSNATAENLQALNIYSRAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALMGLEQAKGYALDLRDQALNALRHFDAGAEPLRELARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgcttaccagatcagcagccaggcccgcgtcaatgcggcgcttgaatgtttg
cttgttgctccggctcctgagctggcccgtctttacgaggccatgcgctacagcgtcatg
aatggcggcaagcgcgttcgcccgctactggcctatgccgcttgccaggccctgggcagc
gcccccgagcaagccaatggcgcggcgtgtgccgtcgaactgatccacgcctattcgctg
gtgcatgatgatttgcccgcaatggatgatgacgatctgcgacgcggccagcccaccacc
cacaaggccttcgatgaagcctgcgccattctggccggcgacggtttgcaaagccttgcg
ttcagcgccctgctagacccccgactcaacaccctggatgctgaaacgcgcttgcgcatg
gtgactgccctcgcacaggctgcaggcccggcgggcatggtcggcggccaagccattgac
ctcggttctgtaggcatgaagctcgatcaggcggcgctggaaaacatgcatcggcacaag
accggggccctgatcgaagccagtgtgcaactgggcgccctggccagcagcaacgcgact
gccgaaaatcttcaggcactgaacatttactcgcgagccattggtctggcgtttcaggtt
caggacgacattctggatgttgaaagcgataccgcgacgttgggcaaacgccagggcgcc
gatattgcacgcgacaaaccgacctacccggcgctgatgggtctggagcaggccaaaggc
tatgcactggatctgcgcgaccaggcactcaacgccctgcggcattttgatgcaggcgcc
gaaccgctgcgtgaactggcgcgatatatcgttgagcgccgccattaa
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