Pseudomonas sp. ML2-2023-3: V6P94_06180
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Entry
V6P94_06180 CDS
T10712
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00550
Peptidoglycan biosynthesis
psml01100
Metabolic pathways
psml01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6P94_06180 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6P94_06180 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
V6P94_06180 (mrdA)
Enzymes [BR:
psml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6P94_06180 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
V6P94_06180 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WWT72254
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All DBs
Position
1333738..1335633
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AA seq
631 aa
AA seq
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MSQPIRLKDHEKDSRLVRGRVVVGAFVVVGLICVLLARLYYLQVVQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVIADNRPSFSLSMTRERSGDWQQVLDVIVEVLQLAPEDRALFE
KRMKQGRRPFEPVPILFELNEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYM
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEEALAGRRGAVVALNPMTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDSGVISGTSRVYDPGYYQLPNY
DHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSTYMNQFGIGRKVSLDMFE
ESAGLMPSRDWKRATRRQAWFPGETLILGIGQGYMQSTPLQLAQATALIASKGKWIRPHL
AKTIEGVPPVDPDPVPDIVLRDPSNWAKVNHGMQQVVHGARGTARVAGVGAQYLIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPANNPQITVSVMIENGEAGSRVASPVVR
KVMDAWLLGEDGKLKPEYGGPVKAEVTANDQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgattcgccttaaagaccacgagaaagactcacgccttgtgcgcggacgc
gtcgtggtcggcgcatttgtcgtggtgggattgatctgcgtattgctcgcgcgactttat
tatctgcaggtggtgcagtacgagtaccactccaccttgtcagaaaacaaccgggtgcat
gtgcagccgatcccgcctacacggggtttgatctttgaccgtaatggcgtggttattgcg
gacaaccgtcccagcttcagcctgagcatgacccgcgagcgctccggcgactggcagcaa
gtgctcgacgtcattgttgaagtgctgcagcttgcgcctgaagatcgcgccctgtttgaa
aagcgcatgaagcaggggcggcggccatttgagccggtgcccattctgtttgagcttaac
gaagagcagatcgcccggattgctgtaaaccagttccgcctgcccggggtggaggtggtt
gcgcagttggtgcgccattacccgcaaggcgcgcactttgcgcactcggtgggttacatg
gggcggatcaacgagaaagagcttaaaaccctcgatccggtcaactacagcggcacgcac
catatcggcaaaaccggcatcgagcgtttctacgaagccgagttgcacggccaggtgggt
tacgaagaagtcgaaaccaatgcccggggccgggtattgcgggtgcttaagcgtaccgac
ccgatccccggcaaagacatcgtgctcagcctcgatatcaagctgcaagaggcggccgaa
gaggccctggcagggcgtcgtggcgcggtggttgcacttaacccgatgacgggggaagtg
ctggccatggtcagccagccgagtttcgaccccaacctgttcgtgaccggcatcagcttc
aaggcttatgccgagctgcgcgattcgattgatcgcccattgttcaaccgcatcctgcgc
ggcctgtatccacctggttcgaccatcaagcccgccgtcgcaattgcggggctggacagt
ggcgtgatcagtggtacttcacgcgtgtatgaccccggctattaccagttgcccaattac
gatcacaaatatcgtaactggaaccgcaccggtgacggctacgtcgatctggacaccgcg
atcatgcgctccaacgacacctatttttatgatctggcccacaagctggggattgatcgt
ctgtcgacctacatgaatcagttcggtatcgggcgaaaggtctccctggacatgttcgag
gaatccgccgggctgatgccgtcccgcgactggaaacgggccacccggcgtcaggcctgg
ttccccggcgagacgttgattctggggatcggtcagggctacatgcagtccacgcccctg
cagctggcccaggccacggcgctgattgccagtaaaggcaagtggattcgtccgcacctg
gccaagaccatcgaaggcgttccgccggtggatccggatccggtaccggacatcgtcctg
cgtgacccgtccaactgggccaaggtcaaccacggcatgcagcaagtggtgcatggcgca
cgtggcacggcgcgggttgcgggcgttggcgcgcaatacctgattgccggcaaaagcggt
acggcacaggtggtggcgatcaagcagggcgaaaaatacgaccgctccaaggttcaggag
cgtcaccgtgaccacgccttgttcgtcggctttgccccggccaacaacccgcagatcacg
gtctcggtcatgattgaaaacggcgaagccggcagccgcgtagcctcgcctgtggtgcgc
aaggtcatggacgcctggttgctgggtgaagacggcaaactcaaacccgagtacggcggt
cccgtaaaggcagaggttacggccaatgatcagtaa
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