Pseudomonas sp. ML2-2023-3: V6P94_06235
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Entry
V6P94_06235 CDS
T10712
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml03030
DNA replication
psml03430
Mismatch repair
psml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6P94_06235 (holA)
03430 Mismatch repair
V6P94_06235 (holA)
03440 Homologous recombination
V6P94_06235 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psml03032
]
V6P94_06235 (holA)
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_06235 (holA)
Enzymes [BR:
psml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6P94_06235 (holA)
DNA replication proteins [BR:
psml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6P94_06235 (holA)
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6P94_06235 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WWT72264
LinkDB
All DBs
Position
complement(1344828..1345865)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGNLSPIYIISGDDPLLCQEAADAIRSTARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYSSRPAEDTLLLISLPKLDGSA
QKTKWGKALVEGPHTQFVQIWPVDANQLPQWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEDGQITVETVQAAVADSARFDVFGLVDAVLNGEASHALRMLEGLRGE
GVEPPVILWALARELRVLANIALQYSQGIPLDKAFSQARPPVWDKRKPLMSKALQRYSAQ
RWAQLLMDAQRIDAQIKGQAAGSAWNSLSRLALLMCGQRLSLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactcgccaaacacttgcaaggcaatctctcgccgatctac
atcatcagcggcgatgacccgttgctgtgccaggaagcggcagacgccattcgcagcact
gctcgccaacaaggttttgatgaacgccaggtgttcagcgcagacgccagctttgactgg
ggcacgttgctgcaagcgggcgccagcatgtcgctgttcgccgaaaagcgcctgctggaa
ctgcgcctgccctcgggtaaacccggcgacaaaggcgccgcggcactgatcgagtacagc
tcacgcccggccgaagacacccttttgctgatcagcctgcccaagcttgatggcagcgcg
cagaagaccaagtggggcaaggcacttgtcgagggaccccatacccagttcgttcagatc
tggccagtcgacgccaaccagttgcctcaatggattcgccagcgcctgtcacaggcaggc
ttgtctgccagccaggacgcggtcgaactgattgctgcaagggttgagggcaacctgctg
gcggcggcccaggaaatcgaaaagctcaaattgatggccgaagacgggcagatcaccgtc
gaaaccgtacaggccgcggtggctgacagtgcgcgctttgatgtgtttggcctggtcgat
gccgtacttaacggcgaggcttcccacgccttgcgcatgctggagggtttgcgcggtgaa
ggtgtagagcctccggtgatcctctgggcactggcccgtgaactgcgggttctggccaat
attgcgctgcaatacagccagggcattcctctggacaaggctttcagccaggcacgcccc
ccggtctgggacaagcgcaagccgctgatgagcaaggctttgcaacgttactcggcgcag
cgctgggcacagctgttgatggacgcacagcgtatcgatgcgcaaatcaagggtcaggca
gcgggctcggcctggaacagcctgagtcgtctggcgctgctgatgtgcggacaacgcttg
agtctgcctgcggagtaa
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