Pseudomonas sp. ML2-2023-3: V6P94_06805
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Entry
V6P94_06805 CDS
T10712
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00260
Glycine, serine and threonine metabolism
psml00460
Cyanoamino acid metabolism
psml00630
Glyoxylate and dicarboxylate metabolism
psml00670
One carbon pool by folate
psml00680
Methane metabolism
psml01100
Metabolic pathways
psml01110
Biosynthesis of secondary metabolites
psml01120
Microbial metabolism in diverse environments
psml01200
Carbon metabolism
psml01230
Biosynthesis of amino acids
psml01240
Biosynthesis of cofactors
psml04981
Folate transport and metabolism
Module
psml_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V6P94_06805 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V6P94_06805 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6P94_06805 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V6P94_06805 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V6P94_06805 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V6P94_06805 (glyA)
Enzymes [BR:
psml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V6P94_06805 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WWT72369
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Position
complement(1476149..1477402)
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AA seq
417 aa
AA seq
DB search
MFSRDLTLAKFDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKANADIEKKLNSAVFPGSQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKVEECRELANWICDILADINNEAVIDAVREKVKAICAKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgacacttgccaagttcgacgccgacctttttgccgccatggag
caagaagctcagcgccaggaagaacatattgagctgatcgcttcggaaaactacaccagc
ccagcggtcatggaagctcaaggctcggttctgaccaacaaatacgccgaaggctacccg
ggtaagcgctactacggcggctgcgaatacgtcgacgtcgttgagcaactggctatcgac
cgtgcaaaagagctgttcggcgccgattacgccaacgttcagccacacgccggttcccag
gccaacagcgctgtctacctggccctgttgtcggctggcgacaccatcctgggcatgagc
ctggcacacggcggtcacctgacccacggcgccagcgtttcgtcctcgggcaagctgtac
aacgccatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtagagcgt
ctggccgttgagcacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccgcgtttccgcgctatcgctgacaaggttggcgcctacctgttcgtcgac
atggctcacgtagccggtctggtagcggctggcgtttaccctaacccggttccgtttgct
gacgtggtcaccaccaccactcacaaaaccctgcgcggtccacgtggcggcctgatcctg
gccaaggccaacgccgacatcgagaagaagctgaactcggctgtcttcccgggttcgcaa
ggcggcccactggagcacgtcatcgccgccaaggccgtgtgcttcaaagaagctctgcaa
ccagagttcaaggcttaccagcaacaagtcgtgaaaaacgcccaagccatggcatcggtg
tttatcgagcgcggctttgacgtggtatcgggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggcaaagacgctgacgccgcactgggcaaagcgttc
atcaccgtgaacaaaaactccgtgccgaacgatccacgctccccgttcgtgacctcgggt
ctgcgtttcggtactccggctgttaccactcgcggcttcaaagtagaagagtgccgtgaa
ctggctaactggatctgcgacatcctggctgatatcaacaacgaagccgttatcgacgcc
gttcgcgaaaaagtcaaagccatctgcgccaagctgccggtatacggcaactaa
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