Pseudomonas sp. ML2-2023-3: V6P94_07510
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Entry
V6P94_07510 CDS
T10712
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00470
D-Amino acid metabolism
psml00550
Peptidoglycan biosynthesis
psml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6P94_07510 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6P94_07510 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
V6P94_07510 (murD)
Enzymes [BR:
psml01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V6P94_07510 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
Precursor biosynthesis
Amino acid ligase
V6P94_07510 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WWT72496
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Position
1623040..1624386
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLAQRGVSFAVADTRENPPELATLRRDYPQVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIDLFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDIELYVMELSSFQLETTNQLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALTRPLMSEGQPCWTFGLSAPD
FKAFGLREENGEKYLAFEFQNLMPVRELKVRGAHNQANALAALALGHAVGLPFDAMLESL
RNFTGLEHRCQWIRELDGVSYYNDSKATNVGAALAAIDGLGMDMDGKLILIAGGDGKGAD
FSGLRDSVAKYCRAVVLMGRDADLIAEAVGDSVPQVRVSSLDEAIEQSRALAQPGDAVLL
SPACASFDMFKNYEERGQLFARAVEVLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggtgcgctttctagcgcagcggggcgtgtcgtttgccgtagctgacacgcgggaa
aatccaccggagctggccacgctgcgccgtgactacccgcaagtggaagtgcgttgtggc
gaactggatgtcgaattcctgtgccgtgccgacgagctttacgtgagccccggcctggca
ctggcgaccccggccctgcaggcagcggcggcccgtggcgtgaaactgtcgggtgacatc
gacctgttcgcgcgtaacgcaaaggcgccgatcgttgcaataagcggttccaacgccaaa
agcactgtgaccacgctggtcggtgagatggctgcggcagccggcaagcgcgtggcggtc
ggtggcaacctcggcacgccggccctggatcttctgagcgatgacatcgagctgtacgtg
atggagctgtcgagcttccagctggaaaccaccaaccagctgggcgctgaagtggccacc
gtgctcaacgtcagcgaagaccacatggaccgctacagcggcctgcctgcctatcacctg
gccaagcaccggattttccgtggtgccaggcaagtggttgtcaatcgtcaggacgcgttg
acgcgcccactgatgagtgaaggtcagccgtgctggaccttcggcctcagtgcgccggat
ttcaaggcttttggcctgcgtgaagaaaacggcgaaaaatacctcgcctttgaatttcag
aacctgatgccagttcgcgaactgaaggtgcgtggcgctcacaaccaggccaatgcactc
gcggcattggcactgggtcatgccgtgggcttgccgttcgatgccatgctggaaagcctg
cgcaatttcaccggccttgaacaccgctgccagtggatccgcgagctcgatggcgtgagc
tactacaacgactccaaagccaccaacgtcggtgcagcactggctgccatcgatggcttg
ggcatggacatggacggcaagctgatcctgatcgctggcggtgacggcaagggtgccgac
ttcagcggcctgcgtgattcggtcgccaaatactgccgtgccgtcgtgctgatgggtcgt
gatgccgacttgatcgcagaggcggtgggcgactcggtgccacaagtgcgggttagttcg
ctcgacgaagcgatcgagcaaagccgtgcgctggcccagcctggcgatgcggtactgctg
tcgcctgcctgcgccagttttgacatgttcaagaactatgaagagcgcggccagttgttt
gcccgtgccgtggaggtgctggcatga
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