Pseudomonas sp. ML2-2023-3: V6P94_07970
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Entry
V6P94_07970 CDS
T10712
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
V6P94_07970 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_07970 (xseA)
Enzymes [BR:
psml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
V6P94_07970 (xseA)
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
V6P94_07970 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2064
DUF4807
Motif
Other DBs
NCBI-ProteinID:
WWT72580
LinkDB
All DBs
Position
complement(1712962..1714341)
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AA seq
459 aa
AA seq
DB search
MIKDPFARLNLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSPERKVALPAHPQRIGIVSSPTGAVIRDIISVFRRRAPQVELTLIPT
AVQGREATAQIVRALRLADARGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVNA
VGHETDVSIADFVADVRAPTPSAAAELLAPDSSDLQRRIDSLHRRLVMRIRDRLMRDRLR
LDGLARRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAAQHPGRQL
AMLRQRLDSLAERLPRAMREGLKARRMQLQSQMQTLHVVSPLATLGRGYSILLDERGNAI
RSAGQTHNGQRLKARLGEGELQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagacccctttgcaagactcaaccttgaccgagaagtcctgaccgtcagccaa
ctcaatggccgggcgcgggtgttgctcgaagacgtgttcagcaacatctgggtagaaggc
gaaatttccaacctcgcccgccccgcttccggccacgtgtatttcaccctcaaggacagt
ggcgcccaggtgcgttgcgcgctgtttcgcaacaacgcggcgcgggttcgccaggccttg
aaggacggcctggcggtgaaggtccggggcaaggtgtcgttgtttgaaggccgcggtgac
tatcaactgatcctcgatacggtggagcccgcgggtgatggcgcgctgcgcctggccttc
gatgcactgaaagaaaaactcagcgccgaaggcctgttcagccccgagcgcaaggttgcc
ctgcctgctcacccgcagcgcatcggtattgtcagctcgcccaccggagcggtgattcgc
gacatcatcagcgtctttcgtcgccgggcgcctcaggtcgaactgacactgatccccacc
gccgtgcaaggtcgcgaagccacggcgcaaattgtccgggcattgcgactggctgatgcc
cggggtttcgacgccttgatcctggcccgaggcggcggttctctggaagacctgtggtgc
tttaacgaagaagccgtagcccgtgccatcgatgcctgtgtgacgccgattgtcaacgct
gtcggtcatgaaaccgatgtgtccatcgccgactttgtagcggacgtacgcgcgccaacg
ccctctgcggctgctgagttgctggcaccggactcaagtgacctgcaacgccgaattgac
agcctgcaccggcgcctggtgatgcgcattcgcgaccgtttgatgcgcgaccgcttgcga
ctggatggcctggcacgccgcttgcgccaccctggcgaacgcctgcgccagcaggcccag
cgcctggatgacctggacatgcgcatgcgccgagcgttcgagcgcagcctcaatacccgc
cgcgagcgtctgatccgcctcgaaacccgactggcggcacagcatccggggcgccaactg
gccatgttgcgccagcgcctggacagtctggcggaacgcttgccacgggccatgcgcgaa
ggcctcaaggcacgccgcatgcagctgcaaagccagatgcaaaccttgcacgtggtcagc
ccgctggcgacccttgggcgcggctacagcattttgctggatgagcgtggcaatgccatt
cgcagcgccgggcaaacccataacggccagcgcttgaaagccaggctgggcgaaggcgaa
ctgcaagtccgggtcgaggataatcacctcacgcccgtcaccctttccttactggattaa
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