Pseudomonas sp. ML2-2023-3: V6P94_08850
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Entry
V6P94_08850 CDS
T10712
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6P94_08850 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psml03019
]
V6P94_08850 (groL)
03110 Chaperones and folding catalysts [BR:
psml03110
]
V6P94_08850 (groL)
03029 Mitochondrial biogenesis [BR:
psml03029
]
V6P94_08850 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psml04147
]
V6P94_08850 (groL)
Enzymes [BR:
psml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
V6P94_08850 (groL)
Messenger RNA biogenesis [BR:
psml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
V6P94_08850 (groL)
Chaperones and folding catalysts [BR:
psml03110
]
Heat shock proteins
HSP60 / Chaperonin
V6P94_08850 (groL)
Mitochondrial biogenesis [BR:
psml03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
V6P94_08850 (groL)
Exosome [BR:
psml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V6P94_08850 (groL)
Exosomal proteins of other body fluids (saliva and urine)
V6P94_08850 (groL)
Exosomal proteins of breast cancer cells
V6P94_08850 (groL)
Exosomal proteins of colorectal cancer cells
V6P94_08850 (groL)
Exosomal proteins of bladder cancer cells
V6P94_08850 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
WWT72742
LinkDB
All DBs
Position
1901431..1903071
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKSLAKPCADSKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIRELLPVLEAV
AKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVVAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESATLEHLGNAKRVTVTKENTTVIDGAGVEADIQARVTQIRAQVADTTSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIADLKGDNADQNVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIQEDKPAGGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgactccgcccgtaaaaaaatgctggccggtgta
aacgtcctggctgacgcagtaaaagcgaccctgggccctaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgttgccaaagaaatc
gagctgaaagatcgcttcgaaaacatgggcgcgcagctggttaaagacgttgcctcccgt
gccaacgatgacgctggtgacggtactaccactgcaaccgttctggctcaatcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggtatc
gacaaagcgaccatcgccattgtcaaagagctgaaatccctggccaagccatgcgctgac
agcaaggcgatcgctcaggtaggtaccatctctgccaactccgacagctccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcactgttgaagaaggc
tcgggcctggaaaacgaactgtctgttgttgaaggcatgcagtttgaccgtggctacctg
tccccgtacttcgtcaacaaaccagaaaccatgactgccgagctcgacggtccgctgatc
cttctggtcgacaaaaagatctccaacatccgtgaactgctgccagttctggaagctgtt
gccaaagccggtcgcccactgctgatcgtatccgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgcggtatcgtgaaagtcgttgctgttaaagcacctggc
tttggtgatcgtcgtaaggcaatgctgcaggacatcgctgttctgactggcggtaccgtt
atctccgaagagatcggtctgagcctggaaagcgctaccctggaacacctgggtaatgcc
aagcgcgttaccgtaaccaaagaaaacaccaccgttatcgacggtgctggcgttgaagct
gacatccaggctcgtgtgactcagatccgtgctcaagtggctgataccacttcggactac
gaccgtgaaaaactgcaagagcgtctggccaagctgtctggcggcgtagcagtgatcaag
gttggcgctggctctgaagtagaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgtgcagccgttgaagaaggcgtggtacctggcggtggcgtggcactggtt
cgcgctctgcaggcaatcgctgatctgaaaggcgacaacgctgatcagaacgttggtatc
gcactgctgcgtcgtgctgttgaagcacctctgcgccagatcgttgccaactccggtgac
gagccaagcgtagttgtcgacaaagttaagcagggttcgggtaactacggttacaacgca
gccactggcgaatacggcgacatgattgaaatgggtatccttgacccggctaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccactgaggcgatg
atcgctgagatccaggaagacaaaccagctggcggcatgccagacatgggcggcatgggt
ggtatgggcggcatgatgtaa
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