KEGG   Pseudomonas sp. ML2-2023-3: V6P94_09010
Entry
V6P94_09010       CDS       T10712                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
psml  Pseudomonas sp. ML2-2023-3
Pathway
psml02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    V6P94_09010
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psml02022]
    V6P94_09010
Two-component system [BR:psml02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   V6P94_09010
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 FleQ Mg_chelatase MCM AAA_2 AAA_3
Other DBs
NCBI-ProteinID: WWT72773
LinkDB
Position
complement(1937645..1938979)
AA seq 444 aa
MLNSVIVVDDEASIRNAVEQWLSLSGFEVQLFSCAEDCLDQLPAHFAGVIVSDVRMPGMG
GLALLTRLQQLDADLPVILLTGHGDVPMAVEAMREGAYDFLEKPFSPEALLSSLRRALEK
RQLVLENRRLHEQADLRELIDGRLLGVSRSLQTLRRQVLELAPLPVNVLIRGETGSGKEL
VARCLHDFGPRADKPFVALNCAAIPEQLFEAELFGHESGAFTGALGKRIGKLEYADGGTL
FLDEIESMPLAQQAKLLRVLQEQKLERLGSNQSISVNLRVIAATKPDLLEEARAGRFRED
LAYRLTVAQLRLAPLRERREDIPLLYDAFSHSAGERLGRSAQPLSGPQLSRLLSHDWPGN
VRELANVAERDVLGLSEPQLDDPETGQSLVTQQEAFEAQCLRAALTRHKGDIKAVLNELQ
LPRRTLNEKMQRHGLVREAFLGSS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgctcaactcggtgatcgtggtcgatgacgaggccagtattcgtaatgccgtggagcaa
tggctgagcctgagcggctttgaagtgcagttgttcagctgcgccgaagactgcctggat
caactgcctgcgcattttgccggggtgattgtcagtgatgtgcgcatgccggggatgggc
ggccttgcgttgctgacccgcttgcagcaactggatgcggacttgccggtgattttgctg
acaggccacggtgatgtcccgatggccgtcgaagccatgcgcgagggtgcttacgacttt
ctcgaaaaacccttcagccccgaagcactgctgagcagcctgcgtcgagccctggaaaag
cgccagctggtactcgaaaaccgtcgtttgcacgaacaggctgacctgcgcgaactgatc
gacgggcgcttgctgggtgtgtcgcgcagcttgcagaccttgcgtcgtcaggtgctggag
ctggcgccactgccggtcaatgtgttgattcgtggcgagaccggcagcggtaaggaactg
gtcgcccgctgcctgcatgattttggcccccgtgccgacaaacctttcgtggcgctcaac
tgcgccgcaatccccgagcagttgtttgaagccgagctgttcggtcacgaaagcggggca
tttaccggagcgctgggcaagcgcatcggcaagctggagtacgccgatggcgggaccttg
tttctggatgaaatcgaaagcatgcccttggcccagcaagccaaattgctgcgggtgcta
caagagcaaaagctggagcgcctgggctccaatcagagcatcagcgtgaacctgcgggtg
attgccgccaccaaacctgacttgctcgaagaagcccgcgccgggcgttttcgcgaagac
ctggcctatcgactgaccgtggcgcaactgcgcctggcaccgttgcgcgagcgccgagaa
gatattccattgctgtacgacgccttttcacacagtgccggcgaacgcctggggcgcagc
gcacaaccgctgagcgggccacaactgtcccgtttgctgagccacgactggccgggcaat
gtgcgcgaactggccaacgttgccgagcgggacgtactgggcttgagcgaaccgcaactg
gacgaccctgaaacagggcaatcactggtgacgcaacaggaagcctttgaggcgcaatgc
ctgcgtgctgcgctgacccgacataaaggtgatatcaaggcagtgctcaatgaactccaa
ctgccgcgccgtaccctcaatgaaaaaatgcagcgtcatgggctggtgcgcgaggcgttt
ttgggaagcagttaa

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