Pseudomonas sp. ML2-2023-3: V6P94_09350
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Entry
V6P94_09350 CDS
T10712
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6P94_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psml03021
]
V6P94_09350
Transcription machinery [BR:
psml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6P94_09350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
PhyR_sigma-like
HTH_29
GerE
HTH_40
Terminase_5
HTH_11
Phage_antitermQ
DUF722
HTH_Tnp_ISL3
HTH_24
Phage_NinH
MerR
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WWT72835
LinkDB
All DBs
Position
complement(2010977..2011495)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSGDPPYQATITELYCEHHGWLFGWLRRKLGCAHNAADLAQDTFTRILNARESVATLRE
PRAFLSTTARRLIIDQVRRKQIENAYLQELALTAETLENFQSPEQILATLEALEQIAFIL
EGMQDKARQAFVLYYLDGLTQCEIARQLGLSDRTVRKYLIQALLHCSHSLDT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgggtgaccccccttaccaggcaactattactgagctgtactgcgaacatcac
ggctggctgtttggctggctgcgcagaaagcttggttgcgcacacaatgcggcggatctg
gcacaggacaccttcacccgaattctcaatgcccgcgagtcggtggcgactctgcgtgag
ccccgcgccttcttgagtactacggcacgccgactgatcatcgatcaggtgcgccgcaaa
caaatagagaacgcctacctccaggagctggccctcacggcagaaacactcgagaacttt
caatcacccgagcagatccttgccaccctggaagccctcgagcagatagcgtttatcctt
gagggcatgcaggacaaggcgcgccaggcgtttgtgctgtattacctggacggcctgacc
cagtgtgagattgcccgacaactggggttatctgatcgtacggtgcgcaagtatctgatc
caggccctgctgcactgcagtcacagcctggatacctga
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